Information for 11-TATTATTAGA (Motif 21)

A G C T G C T A G A C T C A G T G T C A C A G T G C A T C G T A A T C G G C T A
Reverse Opposite:
C G A T T A G C C G A T C G T A G T C A C A G T G T C A C T G A C G A T C T G A
p-value:1e-8
log p-value:-2.035e+01
Information Content per bp:1.690
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif4.55%
Number of Background Sequences with motif705.7
Percentage of Background Sequences with motif1.48%
Average Position of motif in Targets54.0 +/- 24.1bp
Average Position of motif in Background49.6 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0129.1_Glis2_2/Jaspar

Match Rank:1
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--TATTATTAGA--
AATATTAATAAAGA
 A C G T A C G T A G C T G C T A G A C T C A G T G T C A C A G T G C A T C G T A A T C G G C T A A C G T A C G T
G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A

MEF2A/MA0052.3/Jaspar

Match Rank:2
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--TATTATTAGA
TCTATTTTTAGA
 A C G T A C G T A G C T G C T A G A C T C A G T G T C A C A G T G C A T C G T A A T C G G C T A
C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A

MEF2D/MA0773.1/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TATTATTAGA
TCTATTTATAGN
 A C G T A C G T A G C T G C T A G A C T C A G T G T C A C A G T G C A T C G T A A T C G G C T A
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

MEF2B/MA0660.1/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TATTATTAGA
GCTATTTATAGC
 A C G T A C G T A G C T G C T A G A C T C A G T G T C A C A G T G C A T C G T A A T C G G C T A
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

HOXD13/MA0909.1/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TATTATTAGA
NTTTTATTGG-
 A C G T A G C T G C T A G A C T C A G T G T C A C A G T G C A T C G T A A T C G G C T A
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TATTATTAGA
TTTTATTRGN
 A G C T G C T A G A C T C A G T G T C A C A G T G C A T C G T A A T C G G C T A
C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

PH0078.1_Hoxd13/Jaspar

Match Rank:7
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TATTATTAGA--
NNANTTTTATTGGNNN
 A C G T A C G T A C G T A C G T A G C T G C T A G A C T C A G T G T C A C A G T G C A T C G T A A T C G G C T A A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

PH0057.1_Hoxb13/Jaspar

Match Rank:8
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TATTATTAGA--
NNAATTTTATTGGNTN
 A C G T A C G T A C G T A C G T A G C T G C T A G A C T C A G T G T C A C A G T G C A T C G T A A T C G G C T A A C G T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:9
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TATTATTAGA
GCTATTTTTAGC
 A C G T A C G T A G C T G C T A G A C T C A G T G T C A C A G T G C A T C G T A A T C G G C T A
C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

HOXA13/MA0650.1/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TATTATTAGA
TTTTTATTGG-
 A C G T A G C T G C T A G A C T C A G T G T C A C A G T G C A T C G T A A T C G G C T A
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T