Information for 16-TGCCAGGCCTGGC (Motif 19)

A G C T A T C G A G T C T A G C C T G A A C T G A T C G A T G C A G T C A G C T A T C G C T A G A G T C
Reverse Opposite:
A C T G A G T C A T G C C T G A A C T G A T C G A T G C A G T C A G C T A C T G C T A G T A G C T C G A
p-value:1e-9
log p-value:-2.088e+01
Information Content per bp:1.781
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif44.5
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets50.4 +/- 22.7bp
Average Position of motif in Background44.6 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.82
Offset:2
Orientation:reverse strand
Alignment:TGCCAGGCCTGGC
--CNAGGCCT---
 A G C T A T C G A G T C T A G C C T G A A C T G A T C G A T G C A G T C A G C T A T C G C T A G A G T C
A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:TGCCAGGCCTGGC
--CTAGGCCT---
 A G C T A T C G A G T C T A G C C T G A A C T G A T C G A T G C A G T C A G C T A T C G C T A G A G T C
A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---TGCCAGGCCTGGC
GGGGCCGAGGCCTG--
 A C G T A C G T A C G T A G C T A T C G A G T C T A G C C T G A A C T G A T C G A T G C A G T C A G C T A T C G C T A G A G T C
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TGCCAGGCCTGGC---
-GTCATGCHTGRCTGS
 A G C T A T C G A G T C T A G C C T G A A C T G A T C G A T G C A G T C A G C T A T C G C T A G A G T C A C G T A C G T A C G T
A C G T A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

PB0180.1_Sp4_2/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGCCAGGCCTGGC---
-CAAAGGCGTGGCCAG
 A G C T A T C G A G T C T A G C C T G A A C T G A T C G A T G C A G T C A G C T A T C G C T A G A G T C A C G T A C G T A C G T
A C G T A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.57
Offset:5
Orientation:forward strand
Alignment:TGCCAGGCCTGGC--
-----GGTCTGGCAT
 A G C T A T C G A G T C T A G C C T G A A C T G A T C G A T G C A G T C A G C T A T C G C T A G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGCCAGGCCTGGC---
NGTCACGCTTGGCTGC
 A G C T A T C G A G T C T A G C C T G A A C T G A T C G A T G C A G T C A G C T A T C G C T A G A G T C A C G T A C G T A C G T
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TGCCAGGCCTGGC
NTCAAGGTCA---
 A G C T A T C G A G T C T A G C C T G A A C T G A T C G A T G C A G T C A G C T A T C G C T A G A G T C
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGCCAGGCCTGGC--
TCCCAGMCRAGCCCC
 A G C T A T C G A G T C T A G C C T G A A C T G A T C G A T G C A G T C A G C T A T C G C T A G A G T C A C G T A C G T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TGCCAGGCCTGGC
ATGCCCGGGCATGT-
 A C G T A C G T A G C T A T C G A G T C T A G C C T G A A C T G A T C G A T G C A G T C A G C T A T C G C T A G A G T C
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T A C G T