Information for 15-GGGAAATAGAACA (Motif 18)

A C T G C T A G A C T G C G T A C G T A C G T A A C G T C G T A T A C G C G T A C G T A A T G C C G T A
Reverse Opposite:
A C G T A T C G A C G T A C G T A G T C A C G T C G T A A C G T A C G T A C G T A G T C A G T C G T A C
p-value:1e-9
log p-value:-2.226e+01
Information Content per bp:1.885
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif8.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets47.9 +/- 22.3bp
Average Position of motif in Background68.5 +/- 20.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GGGAAATAGAACA
--GTCATAAAAN-
 A C T G C T A G A C T G C G T A C G T A C G T A A C G T C G T A T A C G C G T A C G T A A T G C C G T A
A C G T A C G T T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGGAAATAGAACA-
AAAGGTAATAAAATTT
 A C G T A C G T A C T G C T A G A C T G C G T A C G T A C G T A A C G T C G T A T A C G C G T A C G T A A T G C C G T A A C G T
C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T

CDX2/MA0465.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGGAAATAGAACA
AAGCCATAAAA--
 A C T G C T A G A C T G C G T A C G T A C G T A A C G T C G T A T A C G C G T A C G T A A T G C C G T A
T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGGAAATAGAACA
-GGTAATAAAAA-
 A C T G C T A G A C T G C G T A C G T A C G T A A C G T C G T A T A C G C G T A C G T A A T G C C G T A
A C G T C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGGAAATAGAACA
CGGAAGTGAAAC-
 A C T G C T A G A C T G C G T A C G T A C G T A A C G T C G T A T A C G C G T A C G T A A T G C C G T A
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGGAAATAGAACA
-GGAAGTGAAAST
 A C T G C T A G A C T G C G T A C G T A C G T A A C G T C G T A T A C G C G T A C G T A A T G C C G T A
A C G T C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T

CDX1/MA0878.1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GGGAAATAGAACA
--GCAATAAAA--
 A C T G C T A G A C T G C G T A C G T A C G T A A C G T C G T A T A C G C G T A C G T A A T G C C G T A
A C G T A C G T T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GGGAAATAGAACA
ATGCTAAAAATAGAA--
 A C G T A C G T A C G T A C G T A C T G C T A G A C T G C G T A C G T A C G T A A C G T C G T A T A C G C G T A C G T A A T G C C G T A
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T A C G T

PB0115.1_Ehf_2/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GGGAAATAGAACA
AAGATCGGAANTNNNA--
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G A C T G C G T A C G T A C G T A A C G T C G T A T A C G C G T A C G T A A T G C C G T A
C G T A G C T A A T C G C G T A C G A T T G A C C A T G C T A G C G T A C G T A T G C A G A C T G T C A A G T C G C A T G C T A A C G T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GGGAAATAGAACA
-GAAAMTGAAACT
 A C T G C T A G A C T G C G T A C G T A C G T A A C G T C G T A T A C G C G T A C G T A A T G C C G T A
A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T