Information for 10-CAAACAGACAAGA (Motif 11)

G T A C C G T A C G T A C G T A A G T C C G T A A C T G C G T A G T A C C G T A C G T A A C T G C G T A
Reverse Opposite:
C G A T G T A C A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C T G
p-value:1e-10
log p-value:-2.492e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.4 +/- 27.9bp
Average Position of motif in Background76.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gata1/MA0035.3/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CAAACAGACAAGA-
---ANAGATAAGAA
 G T A C C G T A C G T A C G T A A G T C C G T A A C T G C G T A G T A C C G T A C G T A A C T G C G T A A C G T
A C G T A C G T A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CAAACAGACAAGA-----
AGTAAACAAAAAAGAACANN
 A C G T A C G T G T A C C G T A C G T A C G T A A G T C C G T A A C T G C G T A G T A C C G T A C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A T C G A T C G A T C G A C G T A C T G A C T A G G C T A C G T A T A G C C G T A C G A T C G T A

GATA2/MA0036.2/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CAAACAGACAAGA----
---NCAGATAAGAANNN
 G T A C C G T A C G T A C G T A A G T C C G T A A C T G C G T A G T A C C G T A C G T A A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T

Gata4/MA0482.1/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CAAACAGACAAGA
--NNGAGATAAGA
 G T A C C G T A C G T A C G T A A G T C C G T A A C T G C G T A G T A C C G T A C G T A A C T G C G T A
A C G T A C G T T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A

GATA3/MA0037.2/Jaspar

Match Rank:5
Score:0.62
Offset:5
Orientation:forward strand
Alignment:CAAACAGACAAGA
-----AGATAAGA
 G T A C C G T A C G T A C G T A A G T C C G T A A C T G C G T A G T A C C G T A C G T A A C T G C G T A
A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CAAACAGACAAGA
---BCAGACWA--
 G T A C C G T A C G T A C G T A A G T C C G T A A C T G C G T A G T A C C G T A C G T A A C T G C G T A
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CAAACAGACAAGA
--AACCGANA---
 G T A C C G T A C G T A C G T A A G T C C G T A A C T G C G T A G T A C C G T A C G T A A C T G C G T A
A C G T A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A A C G T A C G T A C G T

PB0021.1_Gata3_1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CAAACAGACAAGA-------
TTTTTAGAGATAAGAAATAAAG
 A C G T A C G T G T A C C G T A C G T A C G T A A G T C C G T A A C T G C G T A G T A C C G T A C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G

PB0022.1_Gata5_1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CAAACAGACAAGA----
TAAACTGATAAGAAGAT
 G T A C C G T A C G T A C G T A A G T C C G T A A C T G C G T A G T A C C G T A C G T A A C T G C G T A A C G T A C G T A C G T A C G T
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CAAACAGACAAGA-
----CAGATAAGGN
 G T A C C G T A C G T A C G T A A G T C C G T A A C T G C G T A G T A C C G T A C G T A A C T G C G T A A C G T
A C G T A C G T A C G T A C G T T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A