Information for 7-ATGGTTCTCTGGTTCT (Motif 9)

G C T A A C G T C T A G A C T G A C G T A C G T A G T C C G A T A T G C A C G T A C T G A C T G A C G T A C G T T G A C A G C T
Reverse Opposite:
C T G A A C T G C G T A G T C A G T A C A G T C G T C A A T C G C G T A C T A G T C G A G T C A G T A C A G T C G T C A C G A T
p-value:1e-13
log p-value:-3.159e+01
Information Content per bp:1.731
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets75.8 +/- 14.1bp
Average Position of motif in Background50.1 +/- 22.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.55
Offset:5
Orientation:forward strand
Alignment:ATGGTTCTCTGGTTCT
-----GCTGTGGTTT-
 G C T A A C G T C T A G A C T G A C G T A C G T A G T C C G A T A T G C A C G T A C T G A C T G A C G T A C G T T G A C A G C T
A C G T A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.55
Offset:4
Orientation:forward strand
Alignment:ATGGTTCTCTGGTTCT
----GTCTGTGGTTT-
 G C T A A C G T C T A G A C T G A C G T A C G T A G T C C G A T A T G C A C G T A C T G A C T G A C G T A C G T T G A C A G C T
A C G T A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:3
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:ATGGTTCTCTGGTTCT--
-NNNTCCTTTGTTCTNNN
 G C T A A C G T C T A G A C T G A C G T A C G T A G T C C G A T A T G C A C G T A C T G A C T G A C G T A C G T T G A C A G C T A C G T A C G T
A C G T C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

PB0071.1_Sox4_1/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:ATGGTTCTCTGGTTCT--
-TNNTCCTTTGTTCTNNT
 G C T A A C G T C T A G A C T G A C G T A C G T A G T C C G A T A T G C A C G T A C T G A C T G A C G T A C G T T G A C A G C T A C G T A C G T
A C G T C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

Gfi1b/MA0483.1/Jaspar

Match Rank:5
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:ATGGTTCTCTGGTTCT
----TGCTGTGATTT-
 G C T A A C G T C T A G A C T G A C G T A C G T A G T C C G A T A T G C A C G T A C T G A C T G A C G T A C G T T G A C A G C T
A C G T A C G T A C G T A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:ATGGTTCTCTGGTTCT
GTAGGTCACTGGGTCA
 G C T A A C G T C T A G A C T G A C G T A C G T A G T C C G A T A T G C A C G T A C T G A C T G A C G T A C G T T G A C A G C T
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:ATGGTTCTCTGGTTCT
-----NNTGTGGTTT-
 G C T A A C G T C T A G A C T G A C G T A C G T A G T C C G A T A T G C A C G T A C T G A C T G A C G T A C G T T G A C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:ATGGTTCTCTGGTTCT
AGGVNCCTTTGT----
 G C T A A C G T C T A G A C T G A C G T A C G T A G T C C G A T A T G C A C G T A C T G A C T G A C G T A C G T T G A C A G C T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:ATGGTTCTCTGGTTCT
------CTGTGGTTTN
 G C T A A C G T C T A G A C T G A C G T A C G T A G T C C G A T A T G C A C G T A C T G A C T G A C G T A C G T T G A C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:ATGGTTCTCTGGTTCT
TWGHWACAWTGTWDC-
 G C T A A C G T C T A G A C T G A C G T A C G T A G T C C G A T A T G C A C G T A C T G A C T G A C G T A C G T T G A C A G C T
G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C A C G T