Information for 14-GCACGCGTCC (Motif 44)

A C T G A G T C C G T A A G T C A C T G A G T C A C T G A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A G T C A C T G A G T C A C T G A C G T A C T G A G T C
p-value:1e-5
log p-value:-1.223e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.7 +/- 25.7bp
Average Position of motif in Background58.9 +/- 17.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hes1/MA1099.1/Jaspar

Match Rank:1
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-GCACGCGTCC
GGCACGCGTC-
 A C G T A C T G A G T C C G T A A G T C A C T G A G T C A C T G A C G T A G T C A G T C
T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C A C G T

HEY2/MA0649.1/Jaspar

Match Rank:2
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GCACGCGTCC
GGCACGTGNC-
 A C G T A C T G A G T C C G T A A G T C A C T G A G T C A C T G A C G T A G T C A G T C
A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:3
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GCACGCGTCC
-CACGCA---
 A C T G A G T C C G T A A G T C A C T G A G T C A C T G A C G T A G T C A G T C
A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T

HEY1/MA0823.1/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GCACGCGTCC
GGCACGTGTC-
 A C G T A C T G A G T C C G T A A G T C A C T G A G T C A C T G A C G T A G T C A G T C
A C T G T C A G G A T C T C G A A T G C A C T G A G C T T C A G A G C T A T G C A C G T

Hes2/MA0616.1/Jaspar

Match Rank:5
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GCACGCGTCC---
GCACGTGTCNNNN
 A C T G A G T C C G T A A G T C A C T G A G T C A C T G A C G T A G T C A G T C A C G T A C G T A C G T
A C T G A G T C C G T A A G T C A C T G A G C T A C T G A G C T A T G C A C T G C G A T C G A T C G T A

Npas2/MA0626.1/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GCACGCGTCC
GGCACGTGTC-
 A C G T A C T G A G T C C G T A A G T C A C T G A G T C A C T G A C G T A G T C A G T C
C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GCACGCGTCC
GCACGTGT--
 A C T G A G T C C G T A A G T C A C T G A G T C A C T G A C G T A G T C A G T C
A C T G A G T C C G T A A G T C A C T G A C G T A C T G C A G T A C G T A C G T

Tcfl5/MA0632.1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCACGCGTCC
GGCACGTGCC-
 A C G T A C T G A G T C C G T A A G T C A C T G A G T C A C T G A C G T A G T C A G T C
C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C A C G T

PB0147.1_Max_2/Jaspar

Match Rank:9
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GCACGCGTCC-
GTGCCACGCGACTG
 A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C T G A G T C A C T G A C G T A G T C A G T C A C G T
A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G

HES5/MA0821.1/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GCACGCGTCC
TGGCACGTGCCG
 A C G T A C G T A C T G A G T C C G T A A G T C A C T G A G T C A C T G A C G T A G T C A G T C
G A C T T C A G T C A G A G T C C T G A A G T C C A T G A G C T A C T G A G T C A G T C C T A G