Information for 19-CGCAAAGGTACTC (Motif 37)

A T G C T A C G G T A C G T C A C G T A C G T A C T A G C T A G A C G T C T G A A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A C T A G A G C T G T C A G A T C A G T C G C A T A C G T A C G T A C T G A G T C A T C G
p-value:1e-8
log p-value:-1.874e+01
Information Content per bp:1.791
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.6 +/- 29.7bp
Average Position of motif in Background40.8 +/- 2.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0203.1_Zfp691_2/Jaspar

Match Rank:1
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CGCAAAGGTACTC-------
---TACGAGACTCCTCTAAC
 A T G C T A C G G T A C G T C A C G T A C G T A C T A G C T A G A C G T C T G A A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:2
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CGCAAAGGTACTC-----
-TTCNAAGTACTTNNNNN
 A T G C T A C G G T A C G T C A C G T A C G T A C T A G C T A G A C G T C T G A A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

PB0099.1_Zfp691_1/Jaspar

Match Rank:3
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CGCAAAGGTACTC-----
-CGAACAGTGCTCACTAT
 A T G C T A C G G T A C G T C A C G T A C G T A C T A G C T A G A C G T C T G A A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.50
Offset:5
Orientation:forward strand
Alignment:CGCAAAGGTACTC--
-----CNGTCCTCCC
 A T G C T A C G G T A C G T C A C G T A C G T A C T A G C T A G A C G T C T G A A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:5
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CGCAAAGGTACTC
RACAAWGG-----
 A T G C T A C G G T A C G T C A C G T A C G T A C T A G C T A G A C G T C T G A A G T C A C G T A G T C
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:6
Score:0.49
Offset:5
Orientation:forward strand
Alignment:CGCAAAGGTACTC--
-----AAGCACTTAA
 A T G C T A C G G T A C G T C A C G T A C G T A C T A G C T A G A C G T C T G A A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

PB0112.1_E2F2_2/Jaspar

Match Rank:7
Score:0.49
Offset:-7
Orientation:forward strand
Alignment:-------CGCAAAGGTACTC
CCTTCGGCGCCAAAAGG---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C T A C G G T A C G T C A C G T A C G T A C T A G C T A G A C G T C T G A A G T C A C G T A G T C
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G A C G T A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:8
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:CGCAAAGGTACTC-----
-NNANTGGTGGTCTTNNN
 A T G C T A C G G T A C G T C A C G T A C G T A C T A G C T A G A C G T C T G A A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CGCAAAGGTACTC
TGCCAA-------
 A T G C T A C G G T A C G T C A C G T A C G T A C T A G C T A G A C G T C T G A A G T C A C G T A G T C
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--CGCAAAGGTACTC
CGTGCCAAG------
 A C G T A C G T A T G C T A C G G T A C G T C A C G T A C G T A C T A G C T A G A C G T C T G A A G T C A C G T A G T C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T