Information for 24-TGGAMRMAAATYYWGC (Motif 36)

A C G T C T A G A C T G C G T A G T A C C T G A G T C A C G T A C G T A C G T A A C G T G A C T A G C T G C A T A T C G A G T C
Reverse Opposite:
C T A G A T G C C G T A C T G A C T A G C G T A A C G T A C G T A C G T A C G T A G C T A C T G A C G T A G T C A G T C C G T A
p-value:1e-8
log p-value:-1.985e+01
Information Content per bp:1.833
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.2 +/- 27.4bp
Average Position of motif in Background82.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC2/MA0152.1/Jaspar

Match Rank:1
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGGAMRMAAATYYWGC
TGGAAAA---------
 A C G T C T A G A C T G C G T A G T A C C T G A G T C A C G T A C G T A C G T A A C G T G A C T A G C T G C A T A T C G A G T C
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGGAMRMAAATYYWGC
AATGGAAAAT--------
 A C G T A C G T A C G T C T A G A C T G C G T A G T A C C T G A G T C A C G T A C G T A C G T A A C G T G A C T A G C T G C A T A T C G A G T C
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TGGAMRMAAATYYWGC
TACTGGAAAAAAAA-----
 A C G T A C G T A C G T A C G T C T A G A C T G C G T A G T A C C T G A G T C A C G T A C G T A C G T A A C G T G A C T A G C T G C A T A T C G A G T C
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:4
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TGGAMRMAAATYYWGC
AATGGAAAAT--------
 A C G T A C G T A C G T C T A G A C T G C G T A G T A C C T G A G T C A C G T A C G T A C G T A A C G T G A C T A G C T G C A T A T C G A G T C
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:5
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TGGAMRMAAATYYWGC
NNTGGAAANN--------
 A C G T A C G T A C G T C T A G A C T G C G T A G T A C C T G A G T C A C G T A C G T A C G T A A C G T G A C T A G C T G C A T A T C G A G T C
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TGGAMRMAAATYYWGC
-GGCCATAAATCAC--
 A C G T C T A G A C T G C G T A G T A C C T G A G T C A C G T A C G T A C G T A A C G T G A C T A G C T G C A T A T C G A G T C
A C G T C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C A C G T A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:7
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TGGAMRMAAATYYWGC
-GGCCATAAATCA---
 A C G T C T A G A C T G C G T A G T A C C T G A G T C A C G T A C G T A C G T A A C G T G A C T A G C T G C A T A T C G A G T C
A C G T C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TGGAMRMAAATYYWGC
NATGGAAAAN--------
 A C G T A C G T A C G T C T A G A C T G C G T A G T A C C T G A G T C A C G T A C G T A C G T A A C G T G A C T A G C T G C A T A T C G A G T C
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0171.1_Sox18_2/Jaspar

Match Rank:9
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:TGGAMRMAAATYYWGC--
--NNNNTGAATTCANNNC
 A C G T C T A G A C T G C G T A G T A C C T G A G T C A C G T A C G T A C G T A A C G T G A C T A G C T G C A T A T C G A G T C A C G T A C G T
A C G T A C G T A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C

HOXA5/MA0158.1/Jaspar

Match Rank:10
Score:0.50
Offset:4
Orientation:forward strand
Alignment:TGGAMRMAAATYYWGC
----CACTAATT----
 A C G T C T A G A C T G C G T A G T A C C T G A G T C A C G T A C G T A C G T A A C G T G A C T A G C T G C A T A T C G A G T C
A C G T A C G T A C G T A C G T G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T