Information for 17-CAGATATCCAGGG (Motif 33)

A G T C C T G A A T C G C T G A A C G T C T G A C G A T A G T C A G T C C G T A A C T G A C T G T C A G
Reverse Opposite:
A G T C G T A C G T A C G C A T A C T G T A C G G C T A A G C T T G C A G A C T T A G C A G C T T A C G
p-value:1e-8
log p-value:-2.046e+01
Information Content per bp:1.656
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.50%
Number of Background Sequences with motif390.3
Percentage of Background Sequences with motif0.82%
Average Position of motif in Targets44.0 +/- 28.5bp
Average Position of motif in Background49.6 +/- 24.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:1
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CAGATATCCAGGG
AAGGCCAGATGGTCCGG-
 A C G T A C G T A C G T A C G T A C G T A G T C C T G A A T C G C T G A A C G T C T G A C G A T A G T C A G T C C G T A A C T G A C T G T C A G
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CAGATATCCAGGG--
NNNCTTTCCAGGAAA
 A G T C C T G A A T C G C T G A A C G T C T G A C G A T A G T C A G T C C G T A A C T G A C T G T C A G A C G T A C G T
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAGATATCCAGGG-
SCAGYCADGCATGAC
 A C G T A G T C C T G A A T C G C T G A A C G T C T G A C G A T A G T C A G T C C G T A A C T G A C T G T C A G A C G T
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CAGATATCCAGGG--
---GTCCCCAGGGGA
 A G T C C T G A A T C G C T G A A C G T C T G A C G A T A G T C A G T C C G T A A C T G A C T G T C A G A C G T A C G T
A C G T A C G T A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

PB0159.1_Rfx4_2/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CAGATATCCAGGG--
NNNGTAACTANGNNA
 A G T C C T G A A T C G C T G A A C G T C T G A C G A T A G T C A G T C C G T A A C T G A C T G T C A G A C G T A C G T
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CAGATATCCAGGG--
-----WDNCTGGGCA
 A G T C C T G A A T C G C T G A A C G T C T G A C G A T A G T C A G T C C G T A A C T G A C T G T C A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CAGATATCCAGGG
---ACATCCTGNT
 A G T C C T G A A T C G C T G A A C G T C T G A C G A T A G T C A G T C C G T A A C T G A C T G T C A G
A C G T A C G T A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CAGATATCCAGGG
TGGCAGNCTGCCAG--
 A C G T A C G T A C G T A G T C C T G A A T C G C T G A A C G T C T G A C G A T A G T C A G T C C G T A A C T G A C T G T C A G
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CAGATATCCAGGG--
-NGCTTTCTAGGAAN
 A G T C C T G A A T C G C T G A A C G T C T G A C G A T A G T C A G T C C G T A A C T G A C T G T C A G A C G T A C G T
A C G T C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CAGATATCCAGGG
AAGATATCCTT--
 A G T C C T G A A T C G C T G A A C G T C T G A C G A T A G T C A G T C C G T A A C T G A C T G T C A G
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T A C G T