Information for 15-CACGCGGGTCACG (Motif 31)

A G T C C G T A A T G C A T C G G T A C A C T G A C T G A T C G A G C T A G T C C T G A A G T C A C T G
Reverse Opposite:
A G T C T A C G A G C T A C T G C T G A A T G C A G T C G T A C A C T G A T G C A T C G A C G T A C T G
p-value:1e-9
log p-value:-2.091e+01
Information Content per bp:1.820
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.3 +/- 26.6bp
Average Position of motif in Background66.6 +/- 19.4bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0153.1_Nr2f2_2/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CACGCGGGTCACG--
CGCGCCGGGTCACGTA
 A C G T A G T C C G T A A T G C A T C G G T A C A C T G A C T G A T C G A G C T A G T C C T G A A G T C A C T G A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CACGCGGGTCACG
CACGCA-------
 A G T C C G T A A T G C A T C G G T A C A C T G A C T G A T C G A G C T A G T C C T G A A G T C A C T G
A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CACGCGGGTCACG--
AGAGCGGGGTCAAGTA
 A C G T A G T C C G T A A T G C A T C G G T A C A C T G A C T G A T C G A G C T A G T C C T G A A G T C A C T G A C G T A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CACGCGGGTCACG
-----AGGTCA--
 A G T C C G T A A T G C A T C G G T A C A C T G A C T G A T C G A G C T A G T C C T G A A G T C A C T G
A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T

Hes1/MA1099.1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CACGCGGGTCACG
GGCACGCGTC-----
 A C G T A C G T A G T C C G T A A T G C A T C G G T A C A C T G A C T G A T C G A G C T A G T C C T G A A G T C A C T G
T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C A C G T A C G T A C G T A C G T A C G T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CACGCGGGTCACG
CACGTGGN-----
 A G T C C G T A A T G C A T C G G T A C A C T G A C T G A T C G A G C T A G T C C T G A A G T C A C T G
G T A C C T G A A G T C C T A G G A C T A C T G A T C G A G C T A C G T A C G T A C G T A C G T A C G T

E-box(bHLH)/Promoter/Homer

Match Rank:7
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CACGCGGGTCACG---
----CCGGTCACGTGA
 A G T C C G T A A T G C A T C G G T A C A C T G A C T G A T C G A G C T A G T C C T G A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A

Mitf/MA0620.1/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CACGCGGGTCACG
GGTCACGTGG------
 A C G T A C G T A C G T A G T C C G T A A T G C A T C G G T A C A C T G A C T G A T C G A G C T A G T C C T G A A G T C A C T G
C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:9
Score:0.57
Offset:6
Orientation:forward strand
Alignment:CACGCGGGTCACG-
------AGTCACGC
 A G T C C G T A A T G C A T C G G T A C A C T G A C T G A T C G A G C T A G T C C T G A A G T C A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

Mycn/MA0104.3/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CACGCGGGTCACG
CACGTGGC-----
 A G T C C G T A A T G C A T C G G T A C A C T G A C T G A T C G A G C T A G T C C T G A A G T C A C T G
A G T C C G T A A G T C A C T G A C G T A C T G A T C G G A T C A C G T A C G T A C G T A C G T A C G T