Information for 14-TNDRWTTTGAAAD (Motif 30)

C G A T G T A C C A T G T C G A C G T A A G C T G C A T C A G T T C A G T C G A C T G A C G T A C T G A
Reverse Opposite:
G A C T G C A T G A C T A G C T A G T C G T C A C G T A C T G A G C A T A G C T G T A C C A T G G C T A
p-value:1e-9
log p-value:-2.103e+01
Information Content per bp:1.493
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif27.7
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets38.3 +/- 16.8bp
Average Position of motif in Background50.5 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.73
Offset:2
Orientation:forward strand
Alignment:TNDRWTTTGAAAD
--CGGTTTCAAA-
 C G A T G T A C C A T G T C G A C G T A A G C T G C A T C A G T T C A G T C G A C T G A C G T A C T G A
A C G T A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.69
Offset:4
Orientation:forward strand
Alignment:TNDRWTTTGAAAD
----ATTTGAATT
 C G A T G T A C C A T G T C G A C G T A A G C T G C A T C A G T T C A G T C G A C T G A C G T A C T G A
A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

TCF7L2/MA0523.1/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TNDRWTTTGAAAD---
--AAAGATCAAAGGAA
 C G A T G T A C C A T G T C G A C G T A A G C T G C A T C A G T T C A G T C G A C T G A C G T A C T G A A C G T A C G T A C G T
A C G T A C G T C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.65
Offset:4
Orientation:forward strand
Alignment:TNDRWTTTGAAAD-
----ACATCAAAGG
 C G A T G T A C C A T G T C G A C G T A A G C T G C A T C A G T T C A G T C G A C T G A C G T A C T G A A C G T
A C G T A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TNDRWTTTGAAAD
--NCYAATAAAA-
 C G A T G T A C C A T G T C G A C G T A A G C T G C A T C A G T T C A G T C G A C T G A C G T A C T G A
A C G T A C G T C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:6
Score:0.62
Offset:6
Orientation:forward strand
Alignment:TNDRWTTTGAAAD
------ATTAAA-
 C G A T G T A C C A T G T C G A C G T A A G C T G C A T C A G T T C A G T C G A C T G A C G T A C T G A
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TNDRWTTTGAAAD-
NNTNTCATGAATGT
 C G A T G T A C C A T G T C G A C G T A A G C T G C A T C A G T T C A G T C G A C T G A C G T A C T G A A C G T
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

PB0083.1_Tcf7_1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TNDRWTTTGAAAD-----
-TATAGATCAAAGGAAAA
 C G A T G T A C C A T G T C G A C G T A A G C T G C A T C A G T T C A G T C G A C T G A C G T A C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

POL012.1_TATA-Box/Jaspar

Match Rank:9
Score:0.61
Offset:4
Orientation:forward strand
Alignment:TNDRWTTTGAAAD------
----GTATAAAAGGCGGGG
 C G A T G T A C C A T G T C G A C G T A A G C T G C A T C A G T T C A G T C G A C T G A C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:10
Score:0.61
Offset:4
Orientation:forward strand
Alignment:TNDRWTTTGAAAD------
----GTATAAAAGGCGGGG
 C G A T G T A C C A T G T C G A C G T A A G C T G C A T C A G T T C A G T C G A C T G A C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G