Information for 21-AACTGAATAGKAATTW (Motif 28)

C G T A C T G A A T G C C G A T C T A G C T G A C G T A C A G T C T G A A C T G A C G T C G T A C T G A G A C T G C A T C G T A
Reverse Opposite:
C G A T C G T A C G T A A G C T G A C T G T C A A G T C A G C T G T C A C G A T A G C T A G T C C G T A A T C G A G C T A C G T
p-value:1e-9
log p-value:-2.218e+01
Information Content per bp:1.751
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.6 +/- 13.8bp
Average Position of motif in Background79.0 +/- 8.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:1
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AACTGAATAGKAATTW
TAATTGATTA-------
 A C G T C G T A C T G A A T G C C G A T C T A G C T G A C G T A C A G T C T G A A C T G A C G T C G T A C T G A G A C T G C A T C G T A
C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0034.1_Gbx2/Jaspar

Match Rank:2
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AACTGAATAGKAATTW
AGCGCTAATTAGCGATT-
 A C G T A C G T C G T A C T G A A T G C C G A T C T A G C T G A C G T A C A G T C T G A A C T G A C G T C G T A C T G A G A C T G C A T C G T A
C G T A T A C G T G A C T C A G A T G C A G C T G T C A G C T A C A G T A C G T C T G A T A C G A G T C T A C G C T G A A C G T C A G T A C G T

PH0154.1_Prrx1/Jaspar

Match Rank:3
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AACTGAATAGKAATTW
ANNAGTTAATTAGTTAN--
 A C G T A C G T A C G T C G T A C T G A A T G C C G A T C T A G C T G A C G T A C A G T C T G A A C T G A C G T C G T A C T G A G A C T G C A T C G T A
T C G A A T C G G A C T G T C A T C A G A G C T G A C T C T G A C T G A A G C T A C G T C T G A C T A G A G C T C A G T T G C A A T G C A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AACTGAATAGKAATTW
NNNTATTGAATTGNNN---
 A C G T A C G T A C G T C G T A C T G A A T G C C G A T C T A G C T G A C G T A C A G T C T G A A C T G A C G T C G T A C T G A G A C T G C A T C G T A
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T A C G T A C G T A C G T

PH0092.1_Lhx2/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AACTGAATAGKAATTW
TAAACTAATTAGTGAAC-
 A C G T A C G T C G T A C T G A A T G C C G A T C T A G C T G A C G T A C A G T C T G A A C T G A C G T C G T A C T G A G A C T G C A T C G T A
C G A T T G C A G T C A T C G A G A T C G A C T G T C A C T G A A G C T A C G T C T G A C T A G A G C T C A T G G T C A G T C A A T G C A C G T

PB0022.1_Gata5_1/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AACTGAATAGKAATTW
TAAACTGATAAGAAGAT-
 A C G T A C G T C G T A C T G A A T G C C G A T C T A G C T G A C G T A C A G T C T G A A C T G A C G T C G T A C T G A G A C T G C A T C G T A
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T A C G T

Pax6/MA0069.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AACTGAATAGKAATTW
AANTCATGCGTGAA--
 C G T A C T G A A T G C C G A T C T A G C T G A C G T A C A G T C T G A A C T G A C G T C G T A C T G A G A C T G C A T C G T A
G T C A T C G A A G T C G A C T A T G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A T C G A A C G T A C G T

PH0028.1_En1/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AACTGAATAGKAATTW
GCGAACTAATTAATGC---
 A C G T A C G T A C G T C G T A C T G A A T G C C G A T C T A G C T G A C G T A C A G T C T G A A C T G A C G T C G T A C T G A G A C T G C A T C G T A
T C A G T A G C T A C G T G C A T G C A A G T C A G C T C T G A C T G A C G A T A C G T C T G A C T G A A C G T C T A G T A G C A C G T A C G T A C G T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AACTGAATAGKAATTW
AACCGANA--------
 C G T A C T G A A T G C C G A T C T A G C T G A C G T A C A G T C T G A A C T G A C G T C G T A C T G A G A C T G C A T C G T A
C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AACTGAATAGKAATTW-
--ATGAATATTCATGAG
 C G T A C T G A A T G C C G A T C T A G C T G A C G T A C A G T C T G A A C T G A C G T C G T A C T G A G A C T G C A T C G T A A C G T
A C G T A C G T G C T A A C G T C T A G G T C A C G T A A C G T C G T A C G A T C A G T A G T C C G T A A C G T C T A G C T G A A T C G