Information for 19-TCACCTGGCTGTCCST (Motif 26)

G A C T A T G C G C T A G A T C A G T C A G C T A T C G A C T G A T G C A C G T A T C G A C G T A G T C G A T C A T G C A C G T
Reverse Opposite:
G T C A T A C G C T A G A C T G G T C A A T G C G T C A A T C G G T A C A T G C C T G A C T A G C T A G C G A T A T C G C G T A
p-value:1e-9
log p-value:-2.270e+01
Information Content per bp:1.714
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.02%
Number of Background Sequences with motif102.0
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets52.9 +/- 23.9bp
Average Position of motif in Background47.0 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TCACCTGGCTGTCCST-
----CTGTCTGTCACCT
 G A C T A T G C G C T A G A T C A G T C A G C T A T C G A C T G A T G C A C G T A T C G A C G T A G T C G A T C A T G C A C G T A C G T
A C G T A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:2
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TCACCTGGCTGTCCST-
NNNTGAACTCNNTGACCTCN
 A C G T A C G T A C G T G A C T A T G C G C T A G A T C A G T C A G C T A T C G A C T G A T G C A C G T A T C G A C G T A G T C G A T C A T G C A C G T A C G T
G T A C G A T C G T C A G C A T T C A G G T C A G T C A G T A C A G C T A G T C C G T A T A C G G C A T T A C G T G C A G T A C G A T C G A C T A G T C G A C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TCACCTGGCTGTCCST-
-----TGTCTGDCACCT
 G A C T A T G C G C T A G A T C A G T C A G C T A T C G A C T G A T G C A C G T A T C G A C G T A G T C G A T C A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TCACCTGGCTGTCCST
----CTGTCTGG----
 G A C T A T G C G C T A G A T C A G T C A G C T A T C G A C T G A T G C A C G T A T C G A C G T A G T C G A T C A T G C A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TCACCTGGCTGTCCST-
NNTNNTGTCTGGNNTNG
 G A C T A T G C G C T A G A T C A G T C A G C T A T C G A C T G A T G C A C G T A T C G A C G T A G T C G A T C A T G C A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TCACCTGGCTGTCCST
----TWGTCTGV----
 G A C T A T G C G C T A G A T C A G T C A G C T A T C G A C T G A T G C A C G T A T C G A C G T A G T C G A T C A T G C A C G T
A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.55
Offset:7
Orientation:forward strand
Alignment:TCACCTGGCTGTCCST
-------GCTGTG---
 G A C T A T G C G C T A G A T C A G T C A G C T A T C G A C T G A T G C A C G T A T C G A C G T A G T C G A T C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TCACCTGGCTGTCCST
TACACCTGTC-------
 A C G T G A C T A T G C G C T A G A T C A G T C A G C T A T C G A C T G A T G C A C G T A T C G A C G T A G T C G A T C A T G C A C G T
C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:9
Score:0.54
Offset:6
Orientation:forward strand
Alignment:TCACCTGGCTGTCCST--
------GSCTGTCACTCA
 G A C T A T G C G C T A G A T C A G T C A G C T A T C G A C T G A T G C A C G T A T C G A C G T A G T C G A T C A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TCACCTGGCTGTCCST
NNCACCTGNN-------
 A C G T G A C T A T G C G C T A G A T C A G T C A G C T A T C G A C T G A T G C A C G T A T C G A C G T A G T C G A T C A T G C A C G T
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T