Information for 9-GTGGTTTGAG (Motif 23)

A C T G A G C T A C T G A T C G A C G T G C A T C G A T A T C G C G T A A C T G
Reverse Opposite:
G T A C G C A T A T G C G C T A C G T A C G T A T A G C A G T C T C G A A G T C
p-value:1e-10
log p-value:-2.373e+01
Information Content per bp:1.834
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.56%
Number of Background Sequences with motif168.6
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets64.7 +/- 22.7bp
Average Position of motif in Background48.3 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---GTGGTTTGAG
NNTGTGGTTT---
 A C G T A C G T A C G T A C T G A G C T A C T G A T C G A C G T G C A T C G A T A T C G C G T A A C T G
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--GTGGTTTGAG
CTGTGGTTTN--
 A C G T A C G T A C T G A G C T A C T G A T C G A C G T G C A T C G A T A T C G C G T A A C T G
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---GTGGTTTGAG
GCTGTGGTTT---
 A C G T A C G T A C G T A C T G A G C T A C T G A T C G A C G T G C A T C G A T A T C G C G T A A C T G
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----GTGGTTTGAG
NNHTGTGGTTWN--
 A C G T A C G T A C G T A C G T A C T G A G C T A C T G A T C G A C G T G C A T C G A T A T C G C G T A A C T G
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----GTGGTTTGAG
GTCTGTGGTTT---
 A C G T A C G T A C G T A C G T A C T G A G C T A C T G A T C G A C G T G C A T C G A T A T C G C G T A A C T G
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:6
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GTGGTTTGAG
TTGCGGTTT---
 A C G T A C G T A C T G A G C T A C T G A T C G A C G T G C A T C G A T A T C G C G T A A C T G
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:7
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GTGGTTTGAG
TTTGCGGTTT---
 A C G T A C G T A C G T A C T G A G C T A C T G A T C G A C G T G C A T C G A T A T C G C G T A A C T G
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GTGGTTTGAG-
-TGGTTTCAGT
 A C T G A G C T A C T G A T C G A C G T G C A T C G A T A T C G C G T A A C T G A C G T
A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GTGGTTTGAG--
GTGGCGTGACNG
 A C T G A G C T A C T G A T C G A C G T G C A T C G A T A T C G C G T A A C T G A C G T A C G T
T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTGGTTTGAG
ATGGGGTGAT
 A C T G A G C T A C T G A T C G A C G T G C A T C G A T A T C G C G T A A C T G
T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T