Information for 8-VTTGTGGTTA (Motif 5)

T A G C G A C T C G A T C T A G A G C T T C A G C T A G A G C T G A C T C G T A
Reverse Opposite:
G C A T C T G A T C G A G A T C A G T C T C G A G A T C G C T A C T G A A T C G
p-value:1e-18
log p-value:-4.277e+01
Information Content per bp:1.597
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif5.24%
Number of Background Sequences with motif428.0
Percentage of Background Sequences with motif0.90%
Average Position of motif in Targets52.0 +/- 28.3bp
Average Position of motif in Background53.0 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:VTTGTGGTTA-
-CTGTGGTTTN
 T A G C G A C T C G A T C T A G A G C T T C A G C T A G A G C T G A C T C G T A A C G T
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:VTTGTGGTTA
NNTGTGGTTT
 T A G C G A C T C G A T C T A G A G C T T C A G C T A G A G C T G A C T C G T A
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.94
Offset:0
Orientation:forward strand
Alignment:VTTGTGGTTA
GCTGTGGTTT
 T A G C G A C T C G A T C T A G A G C T T C A G C T A G A G C T G A C T C G T A
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.93
Offset:-1
Orientation:reverse strand
Alignment:-VTTGTGGTTA-
NNHTGTGGTTWN
 A C G T T A G C G A C T C G A T C T A G A G C T T C A G C T A G A G C T G A C T C G T A A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.93
Offset:-1
Orientation:forward strand
Alignment:-VTTGTGGTTA
GTCTGTGGTTT
 A C G T T A G C G A C T C G A T C T A G A G C T T C A G C T A G A G C T G A C T C G T A
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX2/MA0511.2/Jaspar

Match Rank:6
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:VTTGTGGTTA
-TTGCGGTTT
 T A G C G A C T C G A T C T A G A G C T T C A G C T A G A G C T G A C T C G T A
A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

RUNX3/MA0684.1/Jaspar

Match Rank:7
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:VTTGTGGTTA
TTTGCGGTTT
 T A G C G A C T C G A T C T A G A G C T T C A G C T A G A G C T G A C T C G T A
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

PB0122.1_Foxk1_2/Jaspar

Match Rank:8
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----VTTGTGGTTA-
NNNTGTTGTTGTTNG
 A C G T A C G T A C G T A C G T T A G C G A C T C G A T C T A G A G C T T C A G C T A G A G C T G A C T C G T A A C G T
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:VTTGTGGTTA
---GTGGAT-
 T A G C G A C T C G A T C T A G A G C T T C A G C T A G A G C T G A C T C G T A
A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:10
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:VTTGTGGTTA---
--TGTGGATTNNN
 T A G C G A C T C G A T C T A G A G C T T C A G C T A G A G C T G A C T C G T A A C G T A C G T A C G T
A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A