Information for 16-GAATCACAGATGA (Motif 12)

A C T G C G T A C G T A C G A T A G T C G T C A A G T C C G T A A T C G G C T A A C G T A C T G G T C A
Reverse Opposite:
A C G T A G T C C G T A C A G T A T G C A C G T A C T G A C G T A C T G C G T A A C G T A C G T A G T C
p-value:1e-9
log p-value:-2.180e+01
Information Content per bp:1.927
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.5 +/- 16.8bp
Average Position of motif in Background35.0 +/- 19.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GAATCACAGATGA
CAAATCACTG----
 A C G T A C T G C G T A C G T A C G A T A G T C G T C A A G T C C G T A A T C G G C T A A C G T A C T G G T C A
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GAATCACAGATGA
AAATCACAGCA--
 A C T G C G T A C G T A C G A T A G T C G T C A A G T C C G T A A T C G G C T A A C G T A C T G G T C A
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T A C G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GAATCACAGATGA-
AGAGRRACAGCWGAC
 A C G T A C T G C G T A C G T A C G A T A G T C G T C A A G T C C G T A A T C G G C T A A C G T A C T G G T C A A C G T
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:4
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GAATCACAGATGA-
----AACAGATGGT
 A C T G C G T A C G T A C G A T A G T C G T C A A G T C C G T A A T C G G C T A A C G T A C T G G T C A A C G T
A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GAATCACAGATGA
AAATCACTGC---
 A C T G C G T A C G T A C G A T A G T C G T C A A G T C C G T A A T C G G C T A A C G T A C T G G T C A
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GAATCACAGATGA
AAACCACAGC---
 A C T G C G T A C G T A C G A T A G T C G T C A A G T C C G T A A T C G G C T A A C G T A C T G G T C A
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:7
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GAATCACAGATGA
-----ACATATGG
 A C T G C G T A C G T A C G A T A G T C G T C A A G T C C G T A A T C G G C T A A C G T A C T G G T C A
A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GAATCACAGATGA-
--NNVVCAGCTGBN
 A C T G C G T A C G T A C G A T A G T C G T C A A G T C C G T A A T C G G C T A A C G T A C T G G T C A A C G T
A C G T A C G T C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T

TBX1/MA0805.1/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GAATCACAGATGA
---TCACACCT--
 A C T G C G T A C G T A C G A T A G T C G T C A A G T C C G T A A T C G G C T A A C G T A C T G G T C A
A C G T A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T A C G T

Twist2/MA0633.1/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GAATCACAGATGA-
----NACATATGGN
 A C T G C G T A C G T A C G A T A G T C G T C A A G T C C G T A A T C G G C T A A C G T A C T G G T C A A C G T
A C G T A C G T A C G T A C G T G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T