Information for 5-TTGGCTGCTGGGC (Motif 4)

C A G T A G C T A C T G A C T G A G T C A G C T A C T G A G T C A C G T A C T G A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A G T C C G T A A C T G A G T C C T G A A C T G A G T C A G T C C T G A G C T A
p-value:1e-13
log p-value:-3.097e+01
Information Content per bp:1.914
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.7 +/- 24.0bp
Average Position of motif in Background30.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TTGGCTGCTGGGC---
-RGSMTBCTGGGAAAT
 C A G T A G C T A C T G A C T G A G T C A G C T A C T G A G T C A C G T A C T G A C T G A C T G A G T C A C G T A C G T A C G T
A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.65
Offset:4
Orientation:forward strand
Alignment:TTGGCTGCTGGGC-
----WDNCTGGGCA
 C A G T A G C T A C T G A C T G A G T C A G C T A C T G A G T C A C G T A C T G A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTGGCTGCTGGGC--
TCNCCTGCTGNGNNN
 C A G T A G C T A C T G A C T G A G T C A G C T A C T G A G T C A C G T A C T G A C T G A C T G A G T C A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTGGCTGCTGGGC--
TNTCCTGCTGTGNNG
 C A G T A G C T A C T G A C T G A G T C A G C T A C T G A G T C A C G T A C T G A C T G A C T G A G T C A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTGGCTGCTGGGC--
NNTCCTGCTGTGNNN
 C A G T A G C T A C T G A C T G A G T C A G C T A C T G A G T C A C G T A C T G A C T G A C T G A G T C A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTGGCTGCTGGGC
CCCCCTGCTGTG-
 C A G T A G C T A C T G A C T G A G T C A G C T A C T G A G T C A C G T A C T G A C T G A C T G A G T C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TTGGCTGCTGGGC
GGCCYCCTGCTGDGH
 A C G T A C G T C A G T A G C T A C T G A C T G A G T C A G C T A C T G A G T C A C G T A C T G A C T G A C T G A G T C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

PB0149.1_Myb_2/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TTGGCTGCTGGGC-
NNNTGGCAGTTGGTNN
 A C G T A C G T C A G T A G C T A C T G A C T G A G T C A G C T A C T G A G T C A C G T A C T G A C T G A C T G A G T C A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TTGGCTGCTGGGC
---CCTGCTGAGH
 C A G T A G C T A C T G A C T G A G T C A G C T A C T G A G T C A C G T A C T G A C T G A C T G A G T C
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TTGGCTGCTGGGC----
--KGTTGCTAGGMAACA
 C A G T A G C T A C T G A C T G A G T C A G C T A C T G A G T C A C G T A C T G A C T G A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A