Information for 15-CCTGCACTAA (Motif 22)

A G T C A G T C A G C T A C T G A G T C C G T A A T G C A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A T C G A C G T A C T G G T A C C T G A A C T G A C T G
p-value:1e-2
log p-value:-5.383e+00
Information Content per bp:1.927
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif19.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets46.1 +/- 23.1bp
Average Position of motif in Background51.8 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)2.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ISL2/MA0914.1/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CCTGCACTAA-
---GCACTTAA
 A G T C A G T C A G C T A C T G A G T C C G T A A T G C A C G T C G T A C G T A A C G T
A C G T A C G T A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A

HOXA5/MA0158.1/Jaspar

Match Rank:2
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CCTGCACTAA--
----CACTAATT
 A G T C A G T C A G C T A C T G A G T C C G T A A T G C A C G T C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCTGCACTAA--
RGGGCACTAACY
 A G T C A G T C A G C T A C T G A G T C C G T A A T G C A C G T C G T A C G T A A C G T A C G T
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T

NKX3-2/MA0122.2/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CCTGCACTAA-
--ACCACTTAA
 A G T C A G T C A G C T A C T G A G T C C G T A A T G C A C G T C G T A C G T A A C G T
A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CCTGCACTAA
SNGCACCTGCHS---
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C T G A G T C C G T A A T G C A C G T C G T A C G T A
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T

PB0096.1_Zfp187_1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCTGCACTAA---
TTATGTACTAATAA
 A C G T A G T C A G T C A G C T A C T G A G T C C G T A A T G C A C G T C G T A C G T A A C G T A C G T A C G T
A G C T G A C T T C G A G A C T C T A G C G A T C T G A A G T C A G C T G C T A C G T A C G A T C G T A G T C A

PH0039.1_Mnx1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CCTGCACTAA-------
-NNNCACTAATTANTNN
 A G T C A G T C A G C T A C T G A G T C C G T A A T G C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T G C C T A G A T G C G A T C T G C A A T G C G A C T G T C A C G T A G A C T A C G T C T G A T A C G A C G T T G C A T G A C

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCTGCACTAA-
-MRSCACTYAA
 A G T C A G T C A G C T A C T G A G T C C G T A A T G C A C G T C G T A C G T A A C G T
A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

GCM2/MA0767.1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CCTGCACTAA
TACCCGCATN--
 A C G T A C G T A G T C A G T C A G C T A C T G A G T C C G T A A T G C A C G T C G T A C G T A
G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A A C G T A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CCTGCACTAA-
TCGTACCCGCATCATT
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C T G A G T C C G T A A T G C A C G T C G T A C G T A A C G T
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T