Information for 12-GCAATGCAAT (Motif 16)

T A C G A G T C C G T A C G T A C G A T A C T G A G T C C G T A C T G A G C A T
Reverse Opposite:
C G T A G A C T A C G T A C T G G T A C C G T A C G A T C G A T A C T G A T G C
p-value:1e-7
log p-value:-1.659e+01
Information Content per bp:1.787
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif41.9
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets59.7 +/- 23.9bp
Average Position of motif in Background53.9 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----GCAATGCAAT---
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A C G T T A C G A G T C C G T A C G T A C G A T A C T G A G T C C G T A C T G A G C A T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

PB0068.1_Sox1_1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GCAATGCAAT----
AATCAATTCAATAATT
 A C G T A C G T T A C G A G T C C G T A C G T A C G A T A C T G A G T C C G T A C T G A G C A T A C G T A C G T A C G T A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:3
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GCAATGCAAT---
-AGATGCAATCCC
 T A C G A G T C C G T A C G T A C G A T A C T G A G T C C G T A C T G A G C A T A C G T A C G T A C G T
A C G T T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

POU2F2/MA0507.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GCAATGCAAT----
-ATATGCAAATNNN
 T A C G A G T C C G T A C G T A C G A T A C T G A G T C C G T A C T G A G C A T A C G T A C G T A C G T A C G T
A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GCAATGCAAT-
-ATATGCAAAT
 T A C G A G T C C G T A C G T A C G A T A C T G A G T C C G T A C T G A G C A T A C G T
A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GCAATGCAAT-
-TTATGCAAAT
 T A C G A G T C C G T A C G T A C G A T A C T G A G T C C G T A C T G A G C A T A C G T
A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T

PB0055.1_Rfx4_1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCAATGCAAT---
TACCATAGCAACGGT
 A C G T A C G T T A C G A G T C C G T A C G T A C G A T A C T G A G T C C G T A C T G A G C A T A C G T A C G T A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCAATGCAAT---
CCGCATAGCAACGGA
 A C G T A C G T T A C G A G T C C G T A C G T A C G A T A C T G A G T C C G T A C T G A G C A T A C G T A C G T A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GCAATGCAAT----
--TATGCWAATBAV
 T A C G A G T C C G T A C G T A C G A T A C T G A G T C C G T A C T G A G C A T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GCAATGCAAT----
--WATGCAAATGAG
 T A C G A G T C C G T A C G T A C G A T A C T G A G T C C G T A C T G A G C A T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G