Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 836)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 47750)	% of Background Sequences with Motif
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e-62	-1.440e+02	0.0000	58.0	6.94%	114.6	0.24%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e-60	-1.403e+02	0.0000	52.0	6.22%	82.2	0.17%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e-56	-1.296e+02	0.0000	84.0	10.05%	446.1	0.94%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e-48	-1.128e+02	0.0000	47.0	5.62%	101.5	0.21%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e-46	-1.079e+02	0.0000	128.0	15.31%	1534.0	3.23%
Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	NNATGASTCATH	1e-45	-1.058e+02	0.0000	106.0	12.68%	1047.5	2.20%
JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer	RATGASTCAT	1e-45	-1.041e+02	0.0000	106.0	12.68%	1067.9	2.25%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e-44	-1.036e+02	0.0000	114.0	13.64%	1256.8	2.64%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e-43	-1.011e+02	0.0000	72.0	8.61%	445.8	0.94%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e-42	-9.707e+01	0.0000	71.0	8.49%	457.1	0.96%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e-41	-9.593e+01	0.0000	112.0	13.40%	1314.7	2.77%
Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer	GGATGACTCATC	1e-41	-9.576e+01	0.0000	96.0	11.48%	947.9	1.99%
Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	NATGASTCABNN	1e-40	-9.348e+01	0.0000	80.0	9.57%	645.6	1.36%
MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer	WNTGCTGASTCAGCANWTTY	1e-29	-6.893e+01	0.0000	71.0	8.49%	721.7	1.52%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e-23	-5.359e+01	0.0000	109.0	13.04%	2059.7	4.33%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e-19	-4.546e+01	0.0000	121.0	14.47%	2719.6	5.72%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e-18	-4.173e+01	0.0000	108.0	12.92%	2383.4	5.01%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	MACAGGAAGT	1e-17	-3.988e+01	0.0000	47.0	5.62%	558.2	1.17%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e-17	-3.934e+01	0.0000	141.0	16.87%	3718.8	7.82%
Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)	NNAYTTCCTGHN	1e-15	-3.571e+01	0.0000	92.0	11.00%	2023.3	4.26%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e-15	-3.560e+01	0.0000	124.0	14.83%	3217.7	6.77%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e-13	-3.072e+01	0.0000	88.0	10.53%	2058.3	4.33%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e-13	-3.011e+01	0.0000	65.0	7.78%	1281.6	2.70%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e-12	-2.964e+01	0.0000	69.0	8.25%	1429.0	3.01%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e-12	-2.791e+01	0.0000	34.0	4.07%	424.8	0.89%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e-11	-2.565e+01	0.0000	65.0	7.78%	1421.6	2.99%
Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e-11	-2.548e+01	0.0000	219.0	26.20%	8029.0	16.89%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e-9	-2.290e+01	0.0000	62.0	7.42%	1412.5	2.97%
ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer	ANCAGGAAGT	1e-9	-2.241e+01	0.0000	63.0	7.54%	1466.2	3.08%
HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer	VCAGCTGBNN	1e-9	-2.105e+01	0.0000	164.0	19.62%	5805.2	12.21%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e-8	-2.052e+01	0.0000	47.0	5.62%	974.3	2.05%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e-8	-1.975e+01	0.0000	21.0	2.51%	234.3	0.49%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e-8	-1.957e+01	0.0000	93.0	11.12%	2771.5	5.83%
E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e-8	-1.927e+01	0.0000	133.0	15.91%	4528.4	9.53%
Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	NNVVCAGCTGBN	1e-8	-1.908e+01	0.0000	133.0	15.91%	4543.0	9.56%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e-7	-1.841e+01	0.0000	38.0	4.55%	741.6	1.56%
Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer	SNGCACCTGCHS	1e-7	-1.654e+01	0.0000	61.0	7.30%	1640.4	3.45%
SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	AAAGRGGAAGTG	1e-6	-1.595e+01	0.0000	27.0	3.23%	463.6	0.98%
IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer	GRAASTGAAAST	1e-6	-1.559e+01	0.0000	31.0	3.71%	596.7	1.26%
E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e-6	-1.518e+01	0.0000	121.0	14.47%	4307.1	9.06%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e-6	-1.474e+01	0.0000	48.0	5.74%	1224.1	2.58%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e-6	-1.395e+01	0.0000	71.0	8.49%	2188.9	4.60%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e-5	-1.299e+01	0.0000	53.0	6.34%	1503.9	3.16%
ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer	AACATCTGGA	1e-5	-1.245e+01	0.0000	43.0	5.14%	1137.3	2.39%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e-5	-1.186e+01	0.0001	23.0	2.75%	445.1	0.94%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e-4	-1.126e+01	0.0001	79.0	9.45%	2724.7	5.73%
Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e-4	-1.055e+01	0.0002	94.0	11.24%	3470.4	7.30%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e-4	-1.024e+01	0.0003	199.0	23.80%	8680.8	18.26%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e-4	-9.885e+00	0.0004	20.0	2.39%	405.6	0.85%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e-4	-9.878e+00	0.0004	33.0	3.95%	873.7	1.84%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer	CYAAAAATAG	1e-4	-9.639e+00	0.0005	24.0	2.87%	550.7	1.16%
SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e-4	-9.507e+00	0.0005	302.0	36.12%	14240.6	29.96%
ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer	VCAGGTRDRY	1e-4	-9.442e+00	0.0005	125.0	14.95%	5069.2	10.66%
NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer	ACCATCTGTT	1e-4	-9.368e+00	0.0006	97.0	11.60%	3727.9	7.84%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e-3	-9.090e+00	0.0007	51.0	6.10%	1656.1	3.48%
PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	GGAAGTGAAAST	1e-3	-9.024e+00	0.0008	18.0	2.15%	366.0	0.77%
Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer	GCTATTTTTGGM	1e-3	-8.932e+00	0.0008	40.0	4.78%	1202.1	2.53%
Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e-3	-8.824e+00	0.0009	79.0	9.45%	2936.6	6.18%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e-3	-8.608e+00	0.0011	57.0	6.82%	1954.7	4.11%
IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer	AGTTTCAKTTTC	1e-3	-8.563e+00	0.0012	23.0	2.75%	555.7	1.17%
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer	TGTCANYT	1e-3	-8.139e+00	0.0017	194.0	23.21%	8750.0	18.41%
MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e-3	-8.125e+00	0.0017	81.0	9.69%	3099.9	6.52%
ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer	AGTTTCASTTTC	1e-3	-8.044e+00	0.0019	9.0	1.08%	119.1	0.25%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e-3	-7.466e+00	0.0033	55.0	6.58%	1958.8	4.12%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e-3	-7.256e+00	0.0040	21.0	2.51%	536.0	1.13%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer	CTGTTTAC	1e-3	-7.253e+00	0.0040	100.0	11.96%	4114.6	8.66%
Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer	NAACAGCTGG	1e-2	-6.766e+00	0.0063	68.0	8.13%	2627.0	5.53%
ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e-2	-6.649e+00	0.0069	10.0	1.20%	175.6	0.37%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	GCTGTGGTTW	1e-2	-6.417e+00	0.0086	43.0	5.14%	1506.9	3.17%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e-2	-6.347e+00	0.0091	12.0	1.44%	247.4	0.52%
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer	GGGGGAATCCCC	1e-2	-6.039e+00	0.0122	11.0	1.32%	223.4	0.47%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e-2	-5.985e+00	0.0127	101.0	12.08%	4336.4	9.12%
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	VGCTGWCAVB	1e-2	-5.729e+00	0.0162	101.0	12.08%	4374.3	9.20%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e-2	-5.527e+00	0.0196	10.0	1.20%	206.0	0.43%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e-2	-5.253e+00	0.0254	66.0	7.89%	2705.8	5.69%
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e-2	-5.052e+00	0.0306	8.0	0.96%	153.1	0.32%
c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	VCCACGTG	1e-2	-4.938e+00	0.0339	34.0	4.07%	1225.1	2.58%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e-2	-4.850e+00	0.0365	40.0	4.78%	1509.1	3.17%
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e-2	-4.772e+00	0.0390	25.0	2.99%	838.0	1.76%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e-2	-4.705e+00	0.0412	54.0	6.46%	2190.4	4.61%
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e-2	-4.643e+00	0.0433	22.0	2.63%	716.3	1.51%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e-1	-4.448e+00	0.0519	7.0	0.84%	137.2	0.29%
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e-1	-4.155e+00	0.0688	10.0	1.20%	254.0	0.53%
ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer	GGGTTTTGAAGGATGARTAGGAGTT	1e-1	-4.049e+00	0.0755	1.0	0.12%	1.9	0.00%
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e-1	-4.017e+00	0.0771	3.0	0.36%	31.7	0.07%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e-1	-4.000e+00	0.0775	15.0	1.79%	461.0	0.97%
ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e-1	-3.925e+00	0.0826	8.0	0.96%	188.2	0.40%
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e-1	-3.919e+00	0.0826	38.0	4.55%	1512.3	3.18%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e-1	-3.857e+00	0.0864	59.0	7.06%	2549.9	5.36%
NRF(NRF)/Promoter/Homer	STGCGCATGCGC	1e-1	-3.843e+00	0.0867	18.0	2.15%	598.2	1.26%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e-1	-3.832e+00	0.0867	34.0	4.07%	1331.9	2.80%
Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer	VCAKCTGGNNNCCAGMTGBN	1e-1	-3.806e+00	0.0880	10.0	1.20%	268.7	0.57%
ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer	YTKGATAHAGTATTCTWGGTNGGCA	1e-1	-3.789e+00	0.0886	5.0	0.60%	90.7	0.19%
KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer	RGKGGGCGKGGC	1e-1	-3.774e+00	0.0889	99.0	11.84%	4608.6	9.69%
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer	GGAAATTCCC	1e-1	-3.627e+00	0.1019	5.0	0.60%	94.4	0.20%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e-1	-3.516e+00	0.1127	103.0	12.32%	4870.5	10.25%
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer	YTGWCADY	1e-1	-3.440e+00	0.1203	162.0	19.38%	8028.1	16.89%
Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer	YTAATTRAWWCCAGATGT	1e-1	-3.388e+00	0.1255	9.0	1.08%	248.8	0.52%
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e-1	-3.272e+00	0.1395	8.0	0.96%	214.1	0.45%
Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e-1	-3.116e+00	0.1615	17.0	2.03%	608.9	1.28%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e-1	-3.082e+00	0.1653	63.0	7.54%	2878.1	6.05%
ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer	GNCTGTASTRNTGBCTCHTT	1e-1	-3.077e+00	0.1653	3.0	0.36%	45.9	0.10%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e-1	-3.030e+00	0.1708	13.0	1.56%	436.6	0.92%
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer	GWAAYHTGAKMC	1e-1	-2.996e+00	0.1750	41.0	4.90%	1776.9	3.74%
CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e-1	-2.907e+00	0.1894	31.0	3.71%	1293.9	2.72%
Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer	GCTATTTTTAGC	1e-1	-2.850e+00	0.1986	8.0	0.96%	234.4	0.49%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e-1	-2.830e+00	0.2007	14.0	1.67%	495.6	1.04%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e-1	-2.797e+00	0.2056	24.0	2.87%	966.2	2.03%
n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e-1	-2.762e+00	0.2110	38.0	4.55%	1660.6	3.49%
Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer	RACTACAACTCCCAGVAKGC	1e-1	-2.702e+00	0.2219	4.0	0.48%	86.5	0.18%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e-1	-2.662e+00	0.2289	100.0	11.96%	4910.8	10.33%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e-1	-2.625e+00	0.2355	2.0	0.24%	25.8	0.05%
Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e-1	-2.553e+00	0.2508	12.0	1.44%	426.8	0.90%
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer	NGTGTTCAVTSAAGCGKAAA	1e-1	-2.502e+00	0.2615	5.0	0.60%	130.4	0.27%
GFY-Staf(?,Zf)/Promoter/Homer	RACTACAATTCCCAGAAKGC	1e-1	-2.405e+00	0.2856	5.0	0.60%	135.0	0.28%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e-1	-2.372e+00	0.2927	32.0	3.83%	1416.2	2.98%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e-1	-2.359e+00	0.2942	5.0	0.60%	136.1	0.29%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e-1	-2.320e+00	0.3031	21.0	2.51%	875.1	1.84%
KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer	GGGGGTGTGTCC	1e0	-2.269e+00	0.3162	31.0	3.71%	1381.1	2.91%
bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-2.265e+00	0.3162	18.0	2.15%	735.2	1.55%
Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer	AAGGTGTKAA	1e0	-2.218e+00	0.3274	63.0	7.54%	3053.4	6.42%
CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e0	-2.171e+00	0.3403	26.0	3.11%	1143.8	2.41%
GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e0	-2.153e+00	0.3436	4.0	0.48%	105.6	0.22%
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	-2.124e+00	0.3508	17.0	2.03%	703.0	1.48%
FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer	NVWTGTTTAC	1e0	-2.030e+00	0.3824	36.0	4.31%	1677.7	3.53%
Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e0	-2.025e+00	0.3824	41.0	4.90%	1938.3	4.08%
USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e0	-2.018e+00	0.3824	24.0	2.87%	1064.8	2.24%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e0	-1.954e+00	0.4029	182.0	21.77%	9611.2	20.22%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e0	-1.947e+00	0.4029	54.0	6.46%	2639.7	5.55%
Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer	BSNTGTTTACWYWGN	1e0	-1.929e+00	0.4069	12.0	1.44%	480.1	1.01%
ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer	AGAAATGACTTCCCT	1e0	-1.921e+00	0.4069	1.0	0.12%	10.0	0.02%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	-1.915e+00	0.4069	57.0	6.82%	2806.7	5.90%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e0	-1.884e+00	0.4161	69.0	8.25%	3456.6	7.27%
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-1.877e+00	0.4161	49.0	5.86%	2390.2	5.03%
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer	WATGCAAATGAG	1e0	-1.875e+00	0.4161	14.0	1.67%	583.5	1.23%
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer	TGTTKCCTAGCAACM	1e0	-1.864e+00	0.4161	50.0	5.98%	2446.3	5.15%
Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer	NGRTGACGTCAY	1e0	-1.838e+00	0.4227	21.0	2.51%	938.2	1.97%
ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer	GTGGGCCCCA	1e0	-1.827e+00	0.4245	9.0	1.08%	346.7	0.73%
IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	CTTTCANTATGACTV	1e0	-1.811e+00	0.4283	6.0	0.72%	208.6	0.44%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e0	-1.786e+00	0.4360	17.0	2.03%	743.3	1.56%
Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e0	-1.758e+00	0.4451	31.0	3.71%	1467.5	3.09%
Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer	NTAATBNAATTA	1e0	-1.752e+00	0.4451	18.0	2.15%	798.7	1.68%
HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer	RTTATGYAAB	1e0	-1.751e+00	0.4451	27.0	3.23%	1260.9	2.65%
HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	-1.737e+00	0.4452	21.0	2.51%	953.1	2.01%
NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer	NVCACGTG	1e0	-1.736e+00	0.4452	76.0	9.09%	3876.7	8.16%
MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e0	-1.680e+00	0.4645	48.0	5.74%	2383.9	5.01%
bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-1.661e+00	0.4704	16.0	1.91%	710.0	1.49%
Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer	DGTAAACA	1e0	-1.648e+00	0.4731	26.0	3.11%	1226.7	2.58%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e0	-1.636e+00	0.4758	13.0	1.56%	561.9	1.18%
NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-1.608e+00	0.4859	51.0	6.10%	2562.9	5.39%
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e0	-1.607e+00	0.4859	84.0	10.05%	4352.2	9.16%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer	TBGCACGCAA	1e0	-1.586e+00	0.4901	35.0	4.19%	1712.0	3.60%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-1.577e+00	0.4916	28.0	3.35%	1344.9	2.83%
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-1.547e+00	0.5030	9.0	1.08%	372.7	0.78%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e0	-1.536e+00	0.5056	22.0	2.63%	1037.9	2.18%
Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer	CCCCTCCCCCAC	1e0	-1.528e+00	0.5064	9.0	1.08%	374.8	0.79%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-1.518e+00	0.5082	12.0	1.44%	525.4	1.11%
Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer	NNYTAATTAR	1e0	-1.485e+00	0.5221	36.0	4.31%	1788.3	3.76%
GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-1.470e+00	0.5265	6.0	0.72%	233.6	0.49%
FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer	SCHTGTTTACAT	1e0	-1.467e+00	0.5265	22.0	2.63%	1049.6	2.21%
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	ATGCATWATGCATRW	1e0	-1.467e+00	0.5265	22.0	2.63%	1049.2	2.21%
KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer	NRGCCCCRCCCHBNN	1e0	-1.465e+00	0.5265	23.0	2.75%	1102.4	2.32%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e0	-1.463e+00	0.5265	16.0	1.91%	737.7	1.55%
HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer	GTTAATNATTAA	1e0	-1.452e+00	0.5265	4.0	0.48%	140.9	0.30%
c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e0	-1.448e+00	0.5265	23.0	2.75%	1105.2	2.32%
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer	TGGGGAAGGGCM	1e0	-1.435e+00	0.5265	38.0	4.55%	1907.2	4.01%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e0	-1.426e+00	0.5265	28.0	3.35%	1374.5	2.89%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e0	-1.398e+00	0.5351	45.0	5.38%	2294.5	4.83%
FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer	WWTRTAAACAVG	1e0	-1.385e+00	0.5392	25.0	2.99%	1223.3	2.57%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e0	-1.378e+00	0.5398	14.0	1.67%	646.4	1.36%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e0	-1.367e+00	0.5425	29.0	3.47%	1440.4	3.03%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e0	-1.351e+00	0.5479	9.0	1.08%	393.8	0.83%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e0	-1.344e+00	0.5486	71.0	8.49%	3730.3	7.85%
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e0	-1.336e+00	0.5501	3.0	0.36%	101.3	0.21%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e0	-1.336e+00	0.5501	25.0	2.99%	1233.4	2.59%
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	TATGCWAATBAV	1e0	-1.334e+00	0.5501	10.0	1.20%	446.4	0.94%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	-1.310e+00	0.5546	41.0	4.90%	2101.4	4.42%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e0	-1.297e+00	0.5590	6.0	0.72%	248.1	0.52%
KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer	MKGGGYGTGGCC	1e0	-1.289e+00	0.5601	54.0	6.46%	2816.3	5.92%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-1.263e+00	0.5722	183.0	21.89%	9996.4	21.03%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e0	-1.261e+00	0.5722	11.0	1.32%	507.5	1.07%
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer	NGYCATAAAWCH	1e0	-1.235e+00	0.5814	27.0	3.23%	1362.5	2.87%
ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer	AAGGKGRCGCAGGCA	1e0	-1.221e+00	0.5864	8.0	0.96%	357.4	0.75%
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer	TTTTATKRGG	1e0	-1.193e+00	0.5998	32.0	3.83%	1643.6	3.46%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e0	-1.186e+00	0.6012	20.0	2.39%	996.2	2.10%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e0	-1.185e+00	0.6012	13.0	1.56%	623.3	1.31%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e0	-1.180e+00	0.6012	4.0	0.48%	159.2	0.34%
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer	WDNCTGGGCA	1e0	-1.176e+00	0.6012	61.0	7.30%	3239.9	6.82%
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer	SCTGTCAVTCAV	1e0	-1.169e+00	0.6012	11.0	1.32%	520.8	1.10%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e0	-1.154e+00	0.6039	27.0	3.23%	1382.0	2.91%
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer	AGGVNCCTTTGT	1e0	-1.125e+00	0.6188	32.0	3.83%	1662.0	3.50%
MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	RTCATGTGAC	1e0	-1.100e+00	0.6311	37.0	4.43%	1942.1	4.09%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	-1.083e+00	0.6388	5.0	0.60%	218.1	0.46%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-1.077e+00	0.6393	25.0	2.99%	1291.1	2.72%
Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e0	-1.046e+00	0.6559	8.0	0.96%	379.6	0.80%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	-1.026e+00	0.6655	6.0	0.72%	276.7	0.58%
E-box(bHLH)/Promoter/Homer	SSGGTCACGTGA	1e0	-1.015e+00	0.6695	4.0	0.48%	173.4	0.36%
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer	GGCCYCCTGCTGDGH	1e0	-1.014e+00	0.6695	32.0	3.83%	1692.8	3.56%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e0	-1.014e+00	0.6695	12.0	1.44%	598.6	1.26%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer	CCATATATGGNM	1e0	-9.789e-01	0.6838	9.0	1.08%	442.8	0.93%
Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer	NRRTGACGTCAT	1e0	-9.757e-01	0.6838	13.0	1.56%	659.3	1.39%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e0	-9.735e-01	0.6838	16.0	1.91%	823.1	1.73%
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer	RGGGCACTAACY	1e0	-9.657e-01	0.6838	28.0	3.35%	1485.5	3.13%
PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-9.628e-01	0.6838	36.0	4.31%	1929.7	4.06%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e0	-9.595e-01	0.6838	9.0	1.08%	445.9	0.94%
RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e0	-9.494e-01	0.6838	13.0	1.56%	664.7	1.40%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-9.467e-01	0.6838	9.0	1.08%	447.6	0.94%
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-9.198e-01	0.6975	6.0	0.72%	289.1	0.61%
GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e0	-9.121e-01	0.6996	4.0	0.48%	184.0	0.39%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e0	-9.111e-01	0.6996	19.0	2.27%	1002.6	2.11%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e0	-9.013e-01	0.7005	64.0	7.66%	3516.5	7.40%
Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer	RGKGGGCGGAGC	1e0	-8.930e-01	0.7030	46.0	5.50%	2511.1	5.28%
LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer	AAGACCCYYN	1e0	-8.840e-01	0.7060	76.0	9.09%	4198.3	8.83%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-8.838e-01	0.7060	10.0	1.20%	512.5	1.08%
PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer	AAGAACATWHTGTTC	1e0	-8.705e-01	0.7089	7.0	0.84%	350.7	0.74%
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-8.664e-01	0.7089	93.0	11.12%	5164.7	10.86%
ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer	GRTGMTRGAGCC	1e0	-8.613e-01	0.7089	23.0	2.75%	1238.0	2.60%
ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer	ARGAGGMCAAAATGW	1e0	-8.566e-01	0.7090	5.0	0.60%	243.7	0.51%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e0	-8.500e-01	0.7104	17.0	2.03%	906.6	1.91%
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e0	-8.224e-01	0.7269	16.0	1.91%	857.1	1.80%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	-8.196e-01	0.7269	2.0	0.24%	85.6	0.18%
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGMATATDC	1e0	-8.133e-01	0.7270	27.0	3.23%	1475.2	3.10%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e0	-8.126e-01	0.7270	20.0	2.39%	1083.4	2.28%
HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer	RTACGTGC	1e0	-7.949e-01	0.7339	55.0	6.58%	3058.4	6.43%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e0	-7.602e-01	0.7564	85.0	10.17%	4772.8	10.04%
BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	NHAACBGYYV	1e0	-7.157e-01	0.7874	62.0	7.42%	3493.8	7.35%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e0	-7.150e-01	0.7874	12.0	1.44%	658.6	1.39%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	-7.134e-01	0.7874	32.0	3.83%	1792.6	3.77%
ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer	GAGSCCGAGC	1e0	-7.079e-01	0.7874	11.0	1.32%	603.0	1.27%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e0	-7.043e-01	0.7874	30.0	3.59%	1682.1	3.54%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e0	-6.994e-01	0.7874	15.0	1.79%	832.9	1.75%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e0	-6.799e-01	0.7950	159.0	19.02%	9029.9	19.00%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-6.776e-01	0.7950	10.0	1.20%	554.0	1.17%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e0	-6.675e-01	0.7980	8.0	0.96%	441.9	0.93%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	-6.614e-01	0.7994	12.0	1.44%	671.1	1.41%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e0	-6.543e-01	0.8017	41.0	4.90%	2329.3	4.90%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-6.405e-01	0.8095	17.0	2.03%	963.1	2.03%
TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer	GTCACGTGACYV	1e0	-6.349e-01	0.8106	3.0	0.36%	159.8	0.34%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-6.156e-01	0.8229	5.0	0.60%	278.3	0.59%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e0	-6.134e-01	0.8229	10.0	1.20%	569.0	1.20%
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e0	-6.014e-01	0.8277	4.0	0.48%	222.7	0.47%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	AGGTCAAGGTCA	1e0	-5.950e-01	0.8296	4.0	0.48%	223.7	0.47%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e0	-5.877e-01	0.8323	16.0	1.91%	922.1	1.94%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e0	-5.840e-01	0.8323	17.0	2.03%	981.7	2.07%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-5.793e-01	0.8324	8.0	0.96%	460.2	0.97%
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGCATAATTCA	1e0	-5.774e-01	0.8324	7.0	0.84%	402.2	0.85%
ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer	GTCWGCTGTYYCTCT	1e0	-5.746e-01	0.8324	3.0	0.36%	167.9	0.35%
Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer	GCCACRCCCACY	1e0	-5.629e-01	0.8360	15.0	1.79%	872.0	1.83%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e0	-5.508e-01	0.8428	12.0	1.44%	701.4	1.48%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	-5.496e-01	0.8428	8.0	0.96%	467.8	0.98%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-5.369e-01	0.8477	54.0	6.46%	3137.3	6.60%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	-5.359e-01	0.8477	1.0	0.12%	50.3	0.11%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e0	-5.259e-01	0.8503	26.0	3.11%	1526.0	3.21%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-5.202e-01	0.8519	3.0	0.36%	175.9	0.37%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	-5.198e-01	0.8519	22.0	2.63%	1295.1	2.72%
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	-5.041e-01	0.8589	6.0	0.72%	359.6	0.76%
DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer	NWTAAYCYAATCAWN	1e0	-5.001e-01	0.8590	1.0	0.12%	53.3	0.11%
ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer	SMCAGTCWGAKGGAGGAGGC	1e0	-4.947e-01	0.8602	2.0	0.24%	117.0	0.25%
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer	CCTGCTGAGH	1e0	-4.793e-01	0.8703	39.0	4.67%	2304.0	4.85%
GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-4.676e-01	0.8771	7.0	0.84%	428.1	0.90%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e0	-4.666e-01	0.8771	25.0	2.99%	1494.1	3.14%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e0	-4.654e-01	0.8771	32.0	3.83%	1904.1	4.01%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e0	-4.632e-01	0.8771	71.0	8.49%	4169.8	8.77%
E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer	BTKGGCGGGAAA	1e0	-4.461e-01	0.8826	25.0	2.99%	1505.0	3.17%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	-4.393e-01	0.8852	10.0	1.20%	617.0	1.30%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e0	-4.379e-01	0.8852	2.0	0.24%	125.8	0.26%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e0	-4.317e-01	0.8853	3.0	0.36%	190.9	0.40%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e0	-4.294e-01	0.8853	73.0	8.73%	4312.1	9.07%
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-4.259e-01	0.8853	16.0	1.91%	981.7	2.07%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e0	-4.112e-01	0.8937	5.0	0.60%	320.5	0.67%
Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer	WWATRTAAACAN	1e0	-3.900e-01	0.9094	20.0	2.39%	1236.4	2.60%
E2F(E2F)/Hela-CellCycle-Expression/Homer	TTSGCGCGAAAA	1e0	-3.879e-01	0.9094	2.0	0.24%	133.4	0.28%
Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	ANTTMRCASBNNNGTGYKAAN	1e0	-3.857e-01	0.9094	8.0	0.96%	513.2	1.08%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e0	-3.833e-01	0.9094	61.0	7.30%	3653.3	7.69%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e0	-3.810e-01	0.9094	86.0	10.29%	5110.3	10.75%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e0	-3.416e-01	0.9372	123.0	14.71%	7299.2	15.36%
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer	AAACMATTAN	1e0	-3.342e-01	0.9407	12.0	1.44%	779.8	1.64%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-3.262e-01	0.9449	58.0	6.94%	3528.5	7.42%
DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer	TWGHWACAWTGTWDC	1e0	-3.251e-01	0.9449	4.0	0.48%	279.9	0.59%
ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer	NGNTCTAGAACCNGV	1e0	-3.238e-01	0.9449	10.0	1.20%	660.8	1.39%
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer	AGGTCANTGACCTB	1e0	-3.192e-01	0.9449	14.0	1.67%	909.5	1.91%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e0	-3.191e-01	0.9449	2.0	0.24%	146.6	0.31%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e0	-3.191e-01	0.9449	2.0	0.24%	146.6	0.31%
ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer	GARTGGTCATCGCCC	1e0	-3.144e-01	0.9449	2.0	0.24%	147.3	0.31%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e0	-3.126e-01	0.9449	3.0	0.36%	216.3	0.46%
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer	TRAGGTCA	1e0	-3.116e-01	0.9449	171.0	20.45%	10115.7	21.28%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e0	-3.108e-01	0.9449	6.0	0.72%	413.6	0.87%
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer	AGRGGTCA	1e0	-3.033e-01	0.9449	66.0	7.89%	4021.2	8.46%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	ATTTTCCATT	1e0	-2.923e-01	0.9449	27.0	3.23%	1715.4	3.61%
Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e0	-2.915e-01	0.9449	6.0	0.72%	420.2	0.88%
ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-2.777e-01	0.9476	7.0	0.84%	490.7	1.03%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e0	-2.641e-01	0.9573	25.0	2.99%	1615.4	3.40%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e0	-2.586e-01	0.9593	67.0	8.01%	4130.0	8.69%
FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer	TRTTTACTTW	1e0	-2.538e-01	0.9606	25.0	2.99%	1623.6	3.42%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e0	-2.513e-01	0.9606	25.0	2.99%	1625.7	3.42%
DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer	YDGHTACAWTGTADC	1e0	-2.497e-01	0.9606	3.0	0.36%	234.3	0.49%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-2.460e-01	0.9606	65.0	7.78%	4027.9	8.47%
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer	GGGGCTYGKCTGGGA	1e0	-2.417e-01	0.9606	7.0	0.84%	506.8	1.07%
GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e0	-2.388e-01	0.9606	1.0	0.12%	88.6	0.19%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e0	-2.184e-01	0.9753	17.0	2.03%	1157.7	2.44%
HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e0	-2.154e-01	0.9753	10.0	1.20%	715.4	1.50%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	-2.135e-01	0.9753	15.0	1.79%	1035.7	2.18%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e0	-2.079e-01	0.9759	26.0	3.11%	1724.8	3.63%
Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer	YCTTATCTBN	1e0	-2.054e-01	0.9759	21.0	2.51%	1417.8	2.98%
OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	YATGCATATRCATRT	1e0	-1.962e-01	0.9809	1.0	0.12%	98.5	0.21%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-1.954e-01	0.9809	21.0	2.51%	1426.5	3.00%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-1.898e-01	0.9809	74.0	8.85%	4640.1	9.76%
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer	CCATTGTTYB	1e0	-1.773e-01	0.9898	17.0	2.03%	1191.9	2.51%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e0	-1.642e-01	0.9996	37.0	4.43%	2449.5	5.15%
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer	TTRAGTGSYK	1e0	-1.577e-01	1.0000	75.0	8.97%	4755.4	10.00%
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer	NYTAATCCYB	1e0	-1.549e-01	1.0000	15.0	1.79%	1084.1	2.28%
Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e0	-1.470e-01	1.0000	3.0	0.36%	276.2	0.58%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e0	-1.446e-01	1.0000	23.0	2.75%	1605.2	3.38%
PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-1.315e-01	1.0000	14.0	1.67%	1043.0	2.19%
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATATTC	1e0	-1.313e-01	1.0000	1.0	0.12%	119.5	0.25%
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	-1.153e-01	1.0000	3.0	0.36%	295.6	0.62%
TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer	CCWGGAATGY	1e0	-1.151e-01	1.0000	12.0	1.44%	929.3	1.95%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-9.893e-02	1.0000	13.0	1.56%	1016.1	2.14%
ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer	GAGCCTGGTACTGWGCCTGR	1e0	-9.748e-02	1.0000	8.0	0.96%	676.2	1.42%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer	GYCATCMATCAT	1e0	-9.382e-02	1.0000	1.0	0.12%	137.2	0.29%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-9.175e-02	1.0000	104.0	12.44%	6652.8	14.00%
Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer	TGACANARRCCAGRC	1e0	-8.563e-02	1.0000	11.0	1.32%	899.1	1.89%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	-7.690e-02	1.0000	2.0	0.24%	242.7	0.51%
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer	RAACAATGGN	1e0	-7.405e-02	1.0000	25.0	2.99%	1848.0	3.89%
CHR(?)/Hela-CellCycle-Expression/Homer	SRGTTTCAAA	1e0	-7.237e-02	1.0000	14.0	1.67%	1125.7	2.37%
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer	BTBRAGTGSN	1e0	-7.157e-02	1.0000	67.0	8.01%	4485.0	9.43%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e0	-6.928e-02	1.0000	20.0	2.39%	1532.4	3.22%
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer	RGGATTAR	1e0	-6.794e-02	1.0000	23.0	2.75%	1732.4	3.64%
ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer	TGGAACAGMA	1e0	-6.233e-02	1.0000	22.0	2.63%	1680.3	3.53%
Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer	HNRAATCAAT	1e0	-5.065e-02	1.0000	6.0	0.72%	597.2	1.26%
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer	CAAGGHCANV	1e0	-5.058e-02	1.0000	10.0	1.20%	891.2	1.87%
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-4.840e-02	1.0000	2.0	0.24%	273.7	0.58%
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-4.616e-02	1.0000	9.0	1.08%	829.4	1.74%
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer	CCWTTGTYYB	1e0	-4.367e-02	1.0000	47.0	5.62%	3351.6	7.05%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e0	-3.972e-02	1.0000	78.0	9.33%	5303.4	11.16%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-3.855e-02	1.0000	71.0	8.49%	4878.7	10.26%
GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	-3.212e-02	1.0000	1.0	0.12%	196.2	0.41%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e0	-2.685e-02	1.0000	1.0	0.12%	206.6	0.43%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-2.644e-02	1.0000	71.0	8.49%	4963.6	10.44%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-2.327e-02	1.0000	1.0	0.12%	214.5	0.45%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e0	-2.046e-02	1.0000	47.0	5.62%	3496.4	7.36%
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer	YCTTTGTTCC	1e0	-1.691e-02	1.0000	18.0	2.15%	1590.5	3.35%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-1.485e-02	1.0000	7.0	0.84%	789.0	1.66%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e0	-1.006e-02	1.0000	37.0	4.43%	2961.6	6.23%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e0	-2.857e-03	1.0000	1.0	0.12%	332.4	0.70%
FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	0.000e+00	1.0000	0.0	0.00%	59.0	0.12%
Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	0.000e+00	1.0000	0.0	0.00%	114.7	0.24%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	RGGTCADNNAGAGGTCAV	1e0	0.000e+00	1.0000	0.0	0.00%	43.3	0.09%
EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	0.000e+00	1.0000	0.0	0.00%	31.1	0.07%
GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	0.000e+00	1.0000	0.0	0.00%	70.6	0.15%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e0	0.000e+00	1.0000	0.0	0.00%	181.3	0.38%
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	0.000e+00	1.0000	0.0	0.00%	54.4	0.11%
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATWATTCATGA	1e0	0.000e+00	1.0000	0.0	0.00%	17.2	0.04%
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	ATGAATATTCATGAG	1e0	0.000e+00	1.0000	0.0	0.00%	9.3	0.02%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	0.000e+00	1.0000	0.0	0.00%	25.9	0.05%
p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer	NRRRCAWGTCCDGRCATGYY	1e0	0.000e+00	1.0000	0.0	0.00%	87.6	0.18%
Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	0.000e+00	1.0000	0.0	0.00%	16.5	0.03%
Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	0.000e+00	1.0000	0.0	0.00%	26.8	0.06%
Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	0.000e+00	1.0000	0.0	0.00%	104.1	0.22%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e0	0.000e+00	1.0000	0.0	0.00%	24.4	0.05%
T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer	ACTTTCGTTTCT	1e0	0.000e+00	1.0000	0.0	0.00%	15.4	0.03%
TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	204.6	0.43%
ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer	MACCTTCYATGGCTCCCTAKTGCCY	1e0	0.000e+00	1.0000	0.0	0.00%	11.5	0.02%
ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer	CCTCATGGTGYCYTWYTCCCTTGTG	1e0	0.000e+00	1.0000	0.0	0.00%	38.9	0.08%