Information for 3-CAGGTGCCTT (Motif 6)

T A G C G C T A A C T G A C T G C G A T T C A G T G A C A G T C C G A T A G C T
Reverse Opposite:
T C G A G C T A T C A G A C T G A G T C G C T A T G A C T G A C C G A T A T C G
p-value:1e-14
log p-value:-3.434e+01
Information Content per bp:1.647
Number of Target Sequences with motif141.0
Percentage of Target Sequences with motif16.65%
Number of Background Sequences with motif1041.5
Percentage of Background Sequences with motif8.21%
Average Position of motif in Targets49.7 +/- 25.1bp
Average Position of motif in Background49.4 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTGCCTT
NNCAGGTGNN--
 A C G T A C G T T A G C G C T A A C T G A C T G C G A T T C A G T G A C A G T C C G A T A G C T
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:2
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTGCCTT
GACAGGTGTN--
 A C G T A C G T T A G C G C T A A C T G A C T G C G A T T C A G T G A C A G T C C G A T A G C T
C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:3
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTGCCTT
NNCAGGTGCG--
 A C G T A C G T T A G C G C T A A C T G A C T G C G A T T C A G T G A C A G T C C G A T A G C T
G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:4
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--CAGGTGCCTT
AACAGGTGT---
 A C G T A C G T T A G C G C T A A C T G A C T G C G A T T C A G T G A C A G T C C G A T A G C T
C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---CAGGTGCCTT
SDGCAGGTGCNS-
 A C G T A C G T A C G T T A G C G C T A A C T G A C T G C G A T T C A G T G A C A G T C C G A T A G C T
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T

TCF3/MA0522.2/Jaspar

Match Rank:6
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTGCCTT
NNCAGGTGTN--
 A C G T A C G T T A G C G C T A A C T G A C T G C G A T T C A G T G A C A G T C C G A T A G C T
G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:7
Score:0.77
Offset:-5
Orientation:forward strand
Alignment:-----CAGGTGCCTT--
ATCCACAGGTGCGAAAA
 A C G T A C G T A C G T A C G T A C G T T A G C G C T A A C T G A C T G C G A T T C A G T G A C A G T C C G A T A G C T A C G T A C G T
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CAGGTGCCTT
VCAGGTRDRY-
 A C G T T A G C G C T A A C T G A C T G C G A T T C A G T G A C A G T C C G A T A G C T
T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:9
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----CAGGTGCCTT
NNVVCAGCTGBN--
 A C G T A C G T A C G T A C G T T A G C G C T A A C T G A C T G C G A T T C A G T G A C A G T C C G A T A G C T
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:10
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTGCCTT
AACAGGTGNT--
 A C G T A C G T T A G C G C T A A C T G A C T G C G A T T C A G T G A C A G T C C G A T A G C T
G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T A C G T A C G T