Information for 25-CGCGTGCACG (Motif 48)

A G T C A C T G A G T C A C T G A C G T A T C G A G T C C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T A C T G A T G C C G T A A G T C A C T G A G T C A C T G
p-value:1e-3
log p-value:-8.677e+00
Information Content per bp:1.963
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets61.7 +/- 23.0bp
Average Position of motif in Background75.6 +/- 20.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hes1/MA1099.1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CGCGTGCACG
NNCGCGTGNN--
 A C G T A C G T A G T C A C T G A G T C A C T G A C G T A T C G A G T C C G T A A G T C A C T G
C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CGCGTGCACG
TGCGTG----
 A G T C A C T G A G T C A C T G A C G T A T C G A G T C C G T A A G T C A C T G
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CGCGTGCACG
GCGCCTGCGCA
 A C G T A G T C A C T G A G T C A C T G A C G T A T C G A G T C C G T A A G T C A C T G
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

PB0044.1_Mtf1_1/Jaspar

Match Rank:4
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CGCGTGCACG--
GGGCCGTGTGCAAAAA
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C A C T G A C G T A T C G A G T C C G T A A G T C A C T G A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

Tcfl5/MA0632.1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CGCGTGCACG
GGCACGTGCC--
 A C G T A C G T A G T C A C T G A G T C A C T G A C G T A T C G A G T C C G T A A G T C A C T G
C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:6
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:CGCGTGCACG---
-----GCACGTNC
 A G T C A C T G A G T C A C T G A C G T A T C G A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

NRF(NRF)/Promoter/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CGCGTGCACG-
GCGCATGCGCAC
 A C G T A G T C A C T G A G T C A C T G A C G T A T C G A G T C C G T A A G T C A C T G A C G T
A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C

PB0095.1_Zfp161_1/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CGCGTGCACG---
TGGCGCGCGCGCCTGA
 A C G T A C G T A C G T A G T C A C T G A G T C A C T G A C G T A T C G A G T C C G T A A G T C A C T G A C G T A C G T A C G T
C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:9
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:CGCGTGCACG---
-----GCACGTAY
 A G T C A C T G A G T C A C T G A C G T A T C G A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

EGR2/MA0472.2/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGCGTGCACG-
TGCGTGGGCGT
 A G T C A C T G A G T C A C T G A C G T A T C G A G T C C G T A A G T C A C T G A C G T
G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T