Information for 20-GCTCCATGGCTGGAGG (Motif 46)

A C T G A G T C A C G T A G T C A G T C C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C T G C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A G T C A G T C C G T A A C T G A G T C A G T C C G T A A C G T A C T G A C T G C G T A A C T G A G T C
p-value:1e-4
log p-value:-1.134e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets36.8 +/- 16.7bp
Average Position of motif in Background20.7 +/- 2.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GCTCCATGGCTGGAGG
GGCTCYAKCAYC-----
 A C G T A C T G A G T C A C G T A G T C A G T C C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C T G C G T A A C T G A C T G
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C A C G T A C G T A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:2
Score:0.51
Offset:6
Orientation:forward strand
Alignment:GCTCCATGGCTGGAGG-
------GGGCGGGAAGG
 A C T G A G T C A C G T A G T C A G T C C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C T G C G T A A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

E2F6/MA0471.1/Jaspar

Match Rank:3
Score:0.51
Offset:6
Orientation:forward strand
Alignment:GCTCCATGGCTGGAGG-
------GGGCGGGAAGG
 A C T G A G T C A C G T A G T C A G T C C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C T G C G T A A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GCTCCATGGCTGGAGG
GCTCCG----------
 A C T G A G T C A C G T A G T C A G T C C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C T G C G T A A C T G A C T G
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.49
Offset:5
Orientation:forward strand
Alignment:GCTCCATGGCTGGAGG
-----TWGTCTGV---
 A C T G A G T C A C G T A G T C A G T C C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C T G C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:6
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--GCTCCATGGCTGGAGG
CCGCCCAAGGGCAG----
 A C G T A C G T A C T G A G T C A C G T A G T C A G T C C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C T G C G T A A C T G A C T G
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G A C G T A C G T A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:7
Score:0.49
Offset:6
Orientation:forward strand
Alignment:GCTCCATGGCTGGAGG--
------TGTCAGGGGGCG
 A C T G A G T C A C G T A G T C A G T C C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C T G C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:8
Score:0.49
Offset:2
Orientation:forward strand
Alignment:GCTCCATGGCTGGAGG-
--GTCATGCHTGRCTGS
 A C T G A G T C A C G T A G T C A G T C C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C T G C G T A A C T G A C T G A C G T
A C G T A C G T A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.48
Offset:7
Orientation:forward strand
Alignment:GCTCCATGGCTGGAGG-
-------GGCGGGAARN
 A C T G A G T C A C G T A G T C A G T C C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C T G C G T A A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:10
Score:0.48
Offset:6
Orientation:reverse strand
Alignment:GCTCCATGGCTGGAGG--
------TGCCCNGGGGCA
 A C T G A G T C A C G T A G T C A G T C C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C T G C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A