Information for 19-AACAATCATGGAC (Motif 35)

G T C A T G C A T A G C G T C A G C T A G C A T G T A C C T G A A C G T A C T G T A C G T C G A A T G C
Reverse Opposite:
A T C G A G C T A T G C G T A C T C G A A G C T A C T G C G T A C G A T C A G T A T C G A C G T C A G T
p-value:1e-8
log p-value:-1.890e+01
Information Content per bp:1.671
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif11.1
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets59.3 +/- 23.5bp
Average Position of motif in Background64.2 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AACAATCATGGAC
-CCAATCAA----
 G T C A T G C A T A G C G T C A G C T A G C A T G T A C C T G A A C G T A C T G T A C G T C G A A T G C
A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----AACAATCATGGAC
NNNTAACAATTATAN--
 A C G T A C G T A C G T A C G T G T C A T G C A T A G C G T C A G C T A G C A T G T A C C T G A A C G T A C T G T A C G T C G A A T G C
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AACAATCATGGAC
NAACAAT-------
 A C G T G T C A T G C A T A G C G T C A G C T A G C A T G T A C C T G A A C G T A C T G T A C G T C G A A T G C
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AACAATCATGGAC
CCATCAATCAAA---
 A C G T A C G T G T C A T G C A T A G C G T C A G C T A G C A T G T A C C T G A A C G T A C T G T A C G T C G A A T G C
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A A C G T A C G T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AACAATCATGGAC--
-ACATTCATGACACG
 G T C A T G C A T A G C G T C A G C T A G C A T G T A C C T G A A C G T A C T G T A C G T C G A A T G C A C G T A C G T
A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

MF0011.1_HMG_class/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AACAATCATGGAC
AACAAT-------
 G T C A T G C A T A G C G T C A G C T A G C A T G T A C C T G A A C G T A C T G T A C G T C G A A T G C
T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AACAATCATGGAC
AAGGCGAAATCATCGCA
 A C G T A C G T A C G T A C G T G T C A T G C A T A G C G T C A G C T A G C A T G T A C C T G A A C G T A C T G T A C G T C G A A T G C
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

PB0170.1_Sox17_2/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AACAATCATGGAC-
GACCACATTCATACAAT
 A C G T A C G T A C G T G T C A T G C A T A G C G T C A G C T A G C A T G T A C C T G A A C G T A C T G T A C G T C G A A T G C A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AACAATCATGGAC
GYCATCMATCAT----
 A C G T A C G T A C G T G T C A T G C A T A G C G T C A G C T A G C A T G T A C C T G A A C G T A C T G T A C G T C G A A T G C
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T A C G T A C G T A C G T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:10
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------AACAATCATGGAC
NTTNAGAACAATTA-----
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A T G C A T A G C G T C A G C T A G C A T G T A C C T G A A C G T A C T G T A C G T C G A A T G C
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T A C G T A C G T A C G T A C G T