Information for 11-GCTGAGMCGCSCGARG (Motif 18)

A T C G A T G C C G A T T A C G T G C A A T C G G T A C G T A C T A C G T A G C T A C G T G A C T C A G C T G A C T G A A T C G
Reverse Opposite:
A T G C A G C T G A C T A G T C A C T G A T G C A T C G A T G C C A T G C A T G A T G C A C G T A T G C G C T A A T C G A T G C
p-value:1e-10
log p-value:-2.437e+01
Information Content per bp:1.635
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.72%
Number of Background Sequences with motif58.1
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets45.9 +/- 21.6bp
Average Position of motif in Background50.3 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GCTGAGMCGCSCGARG---
-----GCCGCGCAGTGCGT
 A T C G A T G C C G A T T A C G T G C A A T C G G T A C G T A C T A C G T A G C T A C G T G A C T C A G C T G A C T G A A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GCTGAGMCGCSCGARG
CCTGCTGAGH---------
 A C G T A C G T A C G T A T C G A T G C C G A T T A C G T G C A A T C G G T A C G T A C T A C G T A G C T A C G T G A C T C A G C T G A C T G A A T C G
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GCTGAGMCGCSCGARG
NGCTN------------
 A C G T A T C G A T G C C G A T T A C G T G C A A T C G G T A C G T A C T A C G T A G C T A C G T G A C T C A G C T G A C T G A A T C G
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:4
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----GCTGAGMCGCSCGARG
AATTTGCTGAC----------
 A C G T A C G T A C G T A C G T A C G T A T C G A T G C C G A T T A C G T G C A A T C G G T A C G T A C T A C G T A G C T A C G T G A C T C A G C T G A C T G A A T C G
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.50
Offset:-6
Orientation:reverse strand
Alignment:------GCTGAGMCGCSCGARG
TCNCCTGCTGNGNNN-------
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T G C C G A T T A C G T G C A A T C G G T A C G T A C T A C G T A G C T A C G T G A C T C A G C T G A C T G A A T C G
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GCTGAGMCGCSCGARG
TGCTGACTCA-------
 A C G T A T C G A T G C C G A T T A C G T G C A A T C G G T A C G T A C T A C G T A G C T A C G T G A C T C A G C T G A C T G A A T C G
G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Bach1::Mafk/MA0591.1/Jaspar

Match Rank:7
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--GCTGAGMCGCSCGARG
NTGCTGAGTCATCCN---
 A C G T A C G T A T C G A T G C C G A T T A C G T G C A A T C G G T A C G T A C T A C G T A G C T A C G T G A C T C A G C T G A C T G A A T C G
T A C G G A C T A C T G A T G C G A C T A C T G G T C A A T C G C G A T G T A C C G T A A G C T A T G C T A G C A G C T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.50
Offset:-6
Orientation:reverse strand
Alignment:------GCTGAGMCGCSCGARG
TNTCCTGCTGTGNNG-------
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T G C C G A T T A C G T G C A A T C G G T A C G T A C T A C G T A G C T A C G T G A C T C A G C T G A C T G A A T C G
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.49
Offset:-6
Orientation:reverse strand
Alignment:------GCTGAGMCGCSCGARG
NNTCCTGCTGTGNNN-------
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T G C C G A T T A C G T G C A A T C G G T A C G T A C T A C G T A G C T A C G T G A C T C A G C T G A C T G A A T C G
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.49
Offset:0
Orientation:forward strand
Alignment:GCTGAGMCGCSCGARG
GCTGTG----------
 A T C G A T G C C G A T T A C G T G C A A T C G G T A C G T A C T A C G T A G C T A C G T G A C T C A G C T G A C T G A A T C G
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T