Information for 8-CCAGGACACACAG (Motif 16)

A G T C A G T C G T C A A T C G A C T G C G T A A T G C G C T A A T G C C T G A G T A C C G T A A C T G
Reverse Opposite:
A G T C A C G T C A T G A G C T A T C G C G A T A T C G A C G T A G T C A T G C C A G T A C T G A C T G
p-value:1e-10
log p-value:-2.496e+01
Information Content per bp:1.856
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets45.1 +/- 27.7bp
Average Position of motif in Background36.7 +/- 12.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CCAGGACACACAG----
-AAACAGACAAAGGAAT
 A G T C A G T C G T C A A T C G A C T G C G T A A T G C G C T A A T G C C T G A G T A C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CCAGGACACACAG
ANCAGGATGT----
 A C G T A G T C A G T C G T C A A T C G A C T G C G T A A T G C G C T A A T G C C T G A G T A C C G T A A C T G
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CCAGGACACACAG-
----AAAACAAAGG
 A G T C A G T C G T C A A T C G A C T G C G T A A T G C G C T A A T G C C T G A G T A C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

SOX10/MA0442.1/Jaspar

Match Rank:4
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:CCAGGACACACAG
-------ACAAAG
 A G T C A G T C G T C A A T C G A C T G C G T A A T G C G C T A A T G C C T G A G T A C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:5
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CCAGGACACACAG---
-VAGRACAKNCTGTBC
 A G T C A G T C G T C A A T C G A C T G C G T A A T G C G C T A A T G C C T G A G T A C C G T A A C T G A C G T A C G T A C G T
A C G T T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:CCAGGACACACAG-
--------CACAGN
 A G T C A G T C G T C A A T C G A C T G C G T A A T G C G C T A A T G C C T G A G T A C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:7
Score:0.52
Offset:-7
Orientation:forward strand
Alignment:-------CCAGGACACACAG
NNNCTTTCCAGGAAA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C G T C A A T C G A C T G C G T A A T G C G C T A A T G C C T G A G T A C C G T A A C T G
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A A C G T A C G T A C G T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CCAGGACACACAG
NDCAGGAARTNN--
 A C G T A G T C A G T C G T C A A T C G A C T G C G T A A T G C G C T A A T G C C T G A G T A C C G T A A C T G
T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CCAGGACACACAG
CAAGGHCANV---
 A G T C A G T C G T C A A T C G A C T G C G T A A T G C G C T A A T G C C T G A G T A C C G T A A C T G
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-CCAGGACACACAG
NACAGGAAAT----
 A C G T A G T C A G T C G T C A A T C G A C T G C G T A A T G C G C T A A T G C C T G A G T A C C G T A A C T G
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T