Information for 6-GTCACGTCCT (Motif 11)

A C T G A C G T A T G C C G T A A T G C A C T G A G C T A G T C A G T C C G A T
Reverse Opposite:
C G T A C T A G A C T G C T G A G T A C A T C G A C G T A T C G T G C A A G T C
p-value:1e-11
log p-value:-2.670e+01
Information Content per bp:1.838
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.89%
Number of Background Sequences with motif21.6
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets44.2 +/- 26.9bp
Average Position of motif in Background49.6 +/- 39.8bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arntl/MA0603.1/Jaspar

Match Rank:1
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-GTCACGTCCT
GGTCACGTGC-
 A C G T A C T G A C G T A T G C C G T A A T G C A C T G A G C T A G T C A G T C C G A T
C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:2
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:GTCACGTCCT
-GCACGTNC-
 A C T G A C G T A T G C C G T A A T G C A C T G A G C T A G T C A G T C C G A T
A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T

Pax2/MA0067.1/Jaspar

Match Rank:3
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GTCACGTCCT
AGTCACGC---
 A C G T A C T G A C G T A T G C C G T A A T G C A C T G A G C T A G T C A G T C C G A T
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T

BHLHE40/MA0464.2/Jaspar

Match Rank:4
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GTCACGTCCT
GTCACGTGAN
 A C T G A C G T A T G C C G T A A T G C A C T G A G C T A G T C A G T C C G A T
C T A G C A G T T G A C C T G A A G T C C T A G A C G T C A T G G T C A A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:5
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GTCACGTCCT-
-GCACGTACCC
 A C T G A C G T A T G C C G T A A T G C A C T G A G C T A G T C A G T C C G A T A C G T
A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:6
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GTCACGTCCT
BGCACGTA--
 A C T G A C G T A T G C C G T A A T G C A C T G A G C T A G T C A G T C C G A T
A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:7
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GTCACGTCCT
-GCACGTAY-
 A C T G A C G T A T G C C G T A A T G C A C T G A G C T A G T C A G T C C G A T
A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T

TFEB/MA0692.1/Jaspar

Match Rank:8
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GTCACGTCCT
GTCACGTGAT
 A C T G A C G T A T G C C G T A A T G C A C T G A G C T A G T C A G T C C G A T
T C A G A C G T T G A C C G T A A G T C T C A G C A G T C A T G T C G A A G C T

BHLHE41/MA0636.1/Jaspar

Match Rank:9
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GTCACGTCCT
GTCACGTGAC
 A C T G A C G T A T G C C G T A A T G C A C T G A G C T A G T C A G T C C G A T
T C A G C A G T A G T C C G T A A G T C C T A G A G C T A T C G G T C A A G T C

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GTCACGTCCT
NGKCACGTGM-
 A C G T A C T G A C G T A T G C C G T A A T G C A C T G A G C T A G T C A G T C C G A T
T C G A T C A G C A T G A G T C C G T A A G T C C T A G A C G T A C T G G T A C A C G T