Information for 18-ATKAAGCAAAGTA (Motif 27)

G T C A A C G T A C G T C G T A C G T A A C T G A G T C C G T A C G T A C G T A A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C A C G T A C G T C G A T T C A G A G T C A C G T C G A T T G C A C G T A A C G T
p-value:1e-7
log p-value:-1.755e+01
Information Content per bp:1.847
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets70.8 +/- 24.5bp
Average Position of motif in Background78.7 +/- 9.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:forward strand
Alignment:ATKAAGCAAAGTA-
---AAGGCAAGTGT
 G T C A A C G T A C G T C G T A C G T A A C T G A G T C C G T A C G T A C G T A A C T G A C G T C G T A A C G T
A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

POU1F1/MA0784.1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ATKAAGCAAAGTA-
AATATGCAAATTAG
 G T C A A C G T A C G T C G T A C G T A A C T G A G T C C G T A C G T A C G T A A C T G A C G T C G T A A C G T
C G T A C G T A C G A T C T G A G A C T C A T G A G T C G C T A C G T A G T C A C G A T A C G T C G T A C T A G

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:ATKAAGCAAAGTA
AGAAACGAAAGT-
 G T C A A C G T A C G T C G T A C G T A A C T G A G T C C G T A C G T A C G T A A C T G A C G T C G T A
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T

POU3F3/MA0788.1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ATKAAGCAAAGTA
ATTATGCTAATTT
 G T C A A C G T A C G T C G T A C G T A A C T G A G T C C G T A C G T A C G T A A C T G A C G T C G T A
C G T A C G A T C G A T C G T A A C G T C A T G A G T C G C A T C G T A C T G A G C A T C G A T C G A T

PROP1/MA0715.1/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:ATKAAGCAAAGTA
--TAATTTAATTA
 G T C A A C G T A C G T C G T A C G T A A C T G A G T C C G T A C G T A C G T A A C T G A C G T C G T A
A C G T A C G T G C A T C G T A C T G A G C A T G A C T C G A T G T C A C T G A C G A T G A C T C G T A

PH0045.1_Hoxa1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ATKAAGCAAAGTA----
-CTGAGCTAATTACCGT
 G T C A A C G T A C G T C G T A C G T A A C T G A G T C C G T A C G T A C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A G T C G A C T C T A G C T G A T C A G A T G C G A C T T G C A C G T A C G A T A C G T C T G A T G A C A G T C A C T G A G C T

PH0074.1_Hoxd1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:ATKAAGCAAAGTA-----
-NNNAGCTAATTAGCTTA
 G T C A A C G T A C G T C G T A C G T A A C T G A G T C C G T A C G T A C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C G A T G T C A G T A C T G C A T C A G A G T C G A C T T G C A C G T A C G A T A C G T C T G A T C A G A G C T C G A T A G C T G C T A

POU3F2/MA0787.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:ATKAAGCAAAGTA
-TTATGCAAATTA
 G T C A A C G T A C G T C G T A C G T A A C T G A G T C C G T A C G T A C G T A A C T G A C G T C G T A
A C G T C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ATKAAGCAAAGTA
NATGTTGCAA----
 A C G T G T C A A C G T A C G T C G T A C G T A A C T G A G T C C G T A C G T A C G T A A C T G A C G T C G T A
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T A C G T A C G T

PH0050.1_Hoxa3/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:ATKAAGCAAAGTA--
-TTGAGGTAATTAGT
 G T C A A C G T A C G T C G T A C G T A A C T G A G T C C G T A C G T A C G T A A C T G A C G T C G T A A C G T A C G T
A C G T C A G T A G C T T A C G G T C A T C A G A T C G A G C T G T C A G T C A A C G T A C G T C T G A T C A G A G C T