Information for 22-ATTTAGGTGAGTTTTA (Motif 24)

C G T A A C G T A C G T C A G T C G T A A C T G A C T G A C G T A C T G C G T A C T A G C A G T C G A T A C G T A C G T C G T A
Reverse Opposite:
C G A T C G T A C G T A C G T A G T C A A G T C A C G T A G T C C G T A A G T C A G T C C G A T G C T A C G T A C G T A A C G T
p-value:1e-8
log p-value:-1.978e+01
Information Content per bp:1.919
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets77.0 +/- 9.6bp
Average Position of motif in Background34.9 +/- 10.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:forward strand
Alignment:ATTTAGGTGAGTTTTA
---CAGGTAAGTAT--
 C G T A A C G T A C G T C A G T C G T A A C T G A C T G A C G T A C T G C G T A C T A G C A G T C G A T A C G T A C G T C G T A
A C G T A C G T A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:2
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ATTTAGGTGAGTTTTA
TATAAGTAGGTCAA-----
 A C G T A C G T A C G T C G T A A C G T A C G T C A G T C G T A A C T G A C T G A C G T A C T G C G T A C T A G C A G T C G A T A C G T A C G T C G T A
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ATTTAGGTGAGTTTTA
AAYTAGGTCA------
 C G T A A C G T A C G T C A G T C G T A A C T G A C T G A C G T A C T G C G T A C T A G C A G T C G A T A C G T A C G T C G T A
G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T A C G T A C G T A C G T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:4
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:ATTTAGGTGAGTTTTA
---CAGGTGAGG----
 C G T A A C G T A C G T C A G T C G T A A C T G A C T G A C G T A C T G C G T A C T A G C A G T C G A T A C G T A C G T C G T A
A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:ATTTAGGTGAGTTTTA
ATCAAGGTCA------
 C G T A A C G T A C G T C A G T C G T A A C T G A C T G A C G T A C T G C G T A C T A G C A G T C G A T A C G T A C G T C G T A
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:6
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:ATTTAGGTGAGTTTTA---
---NNNGTGACCTTTGNNN
 C G T A A C G T A C G T C A G T C G T A A C T G A C T G A C G T A C T G C G T A C T A G C A G T C G A T A C G T A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

Nr2e1/MA0676.1/Jaspar

Match Rank:7
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:ATTTAGGTGAGTTTTA
------TTGACTTTT-
 C G T A A C G T A C G T C A G T C G T A A C T G A C T G A C G T A C T G C G T A C T A G C A G T C G A T A C G T A C G T C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:8
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:ATTTAGGTGAGTTTTA
----TGCTGTGATTT-
 C G T A A C G T A C G T C A G T C G T A A C T G A C T G A C G T A C T G C G T A C T A G C A G T C G A T A C G T A C G T C G T A
A C G T A C G T A C G T A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-ATTTAGGTGAGTTTTA
AAAWWTGCTGACWWD--
 A C G T C G T A A C G T A C G T C A G T C G T A A C T G A C T G A C G T A C T G C G T A C T A G C A G T C G A T A C G T A C G T C G T A
C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:10
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:ATTTAGGTGAGTTTTA
AAANTGCTGACTNAG-
 C G T A A C G T A C G T C A G T C G T A A C T G A C T G A C G T A C T G C G T A C T A G C A G T C G A T A C G T A C G T C G T A
C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G A C G T