Information for 18-CAGGGGCCWTCCTTCT (Motif 17)

G T A C C G T A C T A G C T A G T A C G C A T G G T A C G T A C G C A T A G C T G T A C A G T C A G C T A C G T A G T C A C G T
Reverse Opposite:
T G C A T A C G G T C A C T G A C T A G A C T G T C G A C G T A A C T G A C T G G T A C A G T C A G T C A G T C C G A T A C T G
p-value:1e-10
log p-value:-2.440e+01
Information Content per bp:1.706
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif18.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets50.2 +/- 25.7bp
Average Position of motif in Background42.0 +/- 23.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:1
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CAGGGGCCWTCCTTCT
-NGGGGATTTCCC---
 G T A C C G T A C T A G C T A G T A C G C A T G G T A C G T A C G C A T A G C T G T A C A G T C A G C T A C G T A G T C A C G T
A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CAGGGGCCWTCCTTCT
--GGGGATTTCC----
 G T A C C G T A C T A G C T A G T A C G C A T G G T A C G T A C G C A T A G C T G T A C A G T C A G C T A C G T A G T C A C G T
A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CAGGGGCCWTCCTTCT
--GGGGATTTCC----
 G T A C C G T A C T A G C T A G T A C G C A T G G T A C G T A C G C A T A G C T G T A C A G T C A G C T A C G T A G T C A C G T
A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T A C G T A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CAGGGGCCWTCCTTCT
-AGGGGAATCCCCT--
 G T A C C G T A C T A G C T A G T A C G C A T G G T A C G T A C G C A T A G C T G T A C A G T C A G C T A C G T A G T C A C G T
A C G T T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CAGGGGCCWTCCTTCT
-AGGGGAATCCCCT--
 G T A C C G T A C T A G C T A G T A C G C A T G G T A C G T A C G C A T A G C T G T A C A G T C A G C T A C G T A G T C A C G T
A C G T T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T A C G T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CAGGGGCCWTCCTTCT
------ACTTCCTGNT
 G T A C C G T A C T A G C T A G T A C G C A T G G T A C G T A C G C A T A G C T G T A C A G T C A G C T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A C T G G C A T

RELA/MA0107.1/Jaspar

Match Rank:7
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CAGGGGCCWTCCTTCT
--GGGAATTTCC----
 G T A C C G T A C T A G C T A G T A C G C A T G G T A C G T A C G C A T A G C T G T A C A G T C A G C T A C G T A G T C A C G T
A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:CAGGGGCCWTCCTTCT
-----GCATTCCAGN-
 G T A C C G T A C T A G C T A G T A C G C A T G G T A C G T A C G C A T A G C T G T A C A G T C A G C T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G A C G T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:CAGGGGCCWTCCTTCT
------ACTTCCTGBT
 G T A C C G T A C T A G C T A G T A C G C A T G G T A C G T A C G C A T A G C T G T A C A G T C A G C T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C A C G T A C G T A G T C A G T C A C G T A T C G A T C G G C A T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:10
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CAGGGGCCWTCCTTCT
---GGGGATTCCCCC-
 G T A C C G T A C T A G C T A G T A C G C A T G G T A C G T A C G C A T A G C T G T A C A G T C A G C T A C G T A G T C A C G T
A C G T A C G T A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C A C G T