Information for 1-NCYAAAAATAGCH (Motif 1)

A C G T T G A C A G C T G C T A C G T A C G T A C G T A C G T A C G A T C T G A C T A G G A T C G T C A
Reverse Opposite:
C A G T C T A G G A T C A G C T G C T A C G A T G C A T G C A T G C A T C G A T C T G A A C T G T G C A
p-value:1e-102
log p-value:-2.365e+02
Information Content per bp:1.547
Number of Target Sequences with motif308.0
Percentage of Target Sequences with motif40.26%
Number of Background Sequences with motif4994.8
Percentage of Background Sequences with motif10.34%
Average Position of motif in Targets51.4 +/- 23.5bp
Average Position of motif in Background50.0 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.97
Offset:0
Orientation:forward strand
Alignment:NCYAAAAATAGCH
DCYAAAAATAGM-
 A C G T T G A C A G C T G C T A C G T A C G T A C G T A C G T A C G A T C T G A C T A G G A T C G T C A
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:2
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:NCYAAAAATAGCH
KCCAAAAATAGC-
 A C G T T G A C A G C T G C T A C G T A C G T A C G T A C G T A C G A T C T G A C T A G G A T C G T C A
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:3
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:NCYAAAAATAGCH
GCTAAAAATAGC-
 A C G T T G A C A G C T G C T A C G T A C G T A C G T A C G T A C G A T C T G A C T A G G A T C G T C A
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:4
Score:0.94
Offset:-2
Orientation:forward strand
Alignment:--NCYAAAAATAGCH
ATGCTAAAAATAGAA
 A C G T A C G T A C G T T G A C A G C T G C T A C G T A C G T A C G T A C G T A C G A T C T G A C T A G G A T C G T C A
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.94
Offset:1
Orientation:forward strand
Alignment:NCYAAAAATAGCH
-CCAAAAATAG--
 A C G T T G A C A G C T G C T A C G T A C G T A C G T A C G T A C G A T C T G A C T A G G A T C G T C A
A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:6
Score:0.90
Offset:0
Orientation:forward strand
Alignment:NCYAAAAATAGCH
TCTAAAAATAGA-
 A C G T T G A C A G C T G C T A C G T A C G T A C G T A C G T A C G A T C T G A C T A G G A T C G T C A
C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:7
Score:0.90
Offset:0
Orientation:forward strand
Alignment:NCYAAAAATAGCH
GCTATAAATAGC-
 A C G T T G A C A G C T G C T A C G T A C G T A C G T A C G T A C G A T C T G A C T A G G A T C G T C A
C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:8
Score:0.90
Offset:0
Orientation:forward strand
Alignment:NCYAAAAATAGCH
ACTATAAATAGA-
 A C G T T G A C A G C T G C T A C G T A C G T A C G T A C G T A C G A T C T G A C T A G G A T C G T C A
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A A C G T

MF0008.1_MADS_class/Jaspar

Match Rank:9
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:NCYAAAAATAGCH
-CCATATATGG--
 A C G T T G A C A G C T G C T A C G T A C G T A C G T A C G T A C G A T C T G A C T A G G A T C G T C A
A C G T G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G A C G T A C G T

Dlx1/MA0879.1/Jaspar

Match Rank:10
Score:0.69
Offset:2
Orientation:forward strand
Alignment:NCYAAAAATAGCH
--CCTAATTATC-
 A C G T T G A C A G C T G C T A C G T A C G T A C G T A C G T A C G A T C T G A C T A G G A T C G T C A
A C G T A C G T T G A C T G A C G A C T T G C A G C T A C G A T A C G T G C T A A C G T A T G C A C G T