Information for 6-TCATATAATG (Motif 35)

A C G T A G T C G T C A A C G T C G T A A C G T C G T A C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T A C G T C G T A A C G T C G T A C A G T A C T G C G T A
p-value:1e-6
log p-value:-1.530e+01
Information Content per bp:1.939
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.8 +/- 31.8bp
Average Position of motif in Background56.0 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0174.1_Sox30_2/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TCATATAATG---
NCGTATTATAATCNTA
 A C G T A C G T A C G T A C G T A G T C G T C A A C G T C G T A A C G T C G T A C G T A A C G T A C T G A C G T A C G T A C G T
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:2
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TCATATAATG-
---GKTAATGR
 A C G T A G T C G T C A A C G T C G T A A C G T C G T A C G T A A C G T A C T G A C G T
A C G T A C G T A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A

PB0079.1_Sry_1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TCATATAATG---
NANTATTATAATTNNN
 A C G T A C G T A C G T A C G T A G T C G T C A A C G T C G T A A C G T C G T A C G T A A C G T A C T G A C G T A C G T A C G T
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

HOXC10/MA0905.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TCATATAATG
GTCGTAAAAT-
 A C G T A C G T A G T C G T C A A C G T C G T A A C G T C G T A C G T A A C G T A C T G
T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:5
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TCATATAATG-
AAAGCTCGTAAAATTT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C G T C G T A A C G T C G T A C G T A A C G T A C T G A C G T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

POU6F2/MA0793.1/Jaspar

Match Rank:6
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TCATATAATG----
----NTAATGAGCT
 A C G T A G T C G T C A A C G T C G T A A C G T C G T A C G T A A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

GSX2/MA0893.1/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TCATATAATG---
---NTTAATTAGN
 A C G T A G T C G T C A A C G T C G T A A C G T C G T A C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C A G T A G C T C G A T C G T A C G T A G C A T C A G T C T G A T A C G C A G T

PH0048.1_Hoxa13/Jaspar

Match Rank:8
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TCATATAATG-
AAACCTCGTAAAATTT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C G T C G T A A C G T C G T A C G T A A C G T A C T G A C G T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

NKX6-2/MA0675.1/Jaspar

Match Rank:9
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TCATATAATG--
----TTAATTAN
 A C G T A G T C G T C A A C G T C G T A A C G T C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C G A T G A C T C G T A C G T A C G A T C A G T C T G A T A C G

PH0152.1_Pou6f1_2/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TCATATAATG-------
AAACATAATGAGGTTGC
 A C G T A G T C G T C A A C G T C G T A A C G T C G T A C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C