Information for 17-TTGGGAACAGAGT (Motif 27)

A C G T A G C T A C T G A T C G A C T G C G T A C G T A A G T C C G T A A C T G C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T A G T C C G A T A C T G A C G T A C G T G T A C A T G C A G T C C T G A C G T A
p-value:1e-8
log p-value:-1.967e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.8 +/- 20.1bp
Average Position of motif in Background84.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TTGGGAACAGAGT
--TGGAACAGMA-
 A C G T A G C T A C T G A T C G A C T G C G T A C G T A A G T C C G T A A C T G C G T A A C T G A C G T
A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTGGGAACAGAGT
CSTGGGAAAD----
 A C G T A C G T A G C T A C T G A T C G A C T G C G T A C G T A A G T C C G T A A C T G C G T A A C T G A C G T
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TTGGGAACAGAGT
---GGAACAAAGR
 A C G T A G C T A C T G A T C G A C T G C G T A C G T A A G T C C G T A A C T G C G T A A C T G A C G T
A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TTGGGAACAGAGT---
-TWGHWACAWTGTWDC
 A C G T A G C T A C T G A T C G A C T G C G T A C G T A A G T C C G T A A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TTGGGAACAGAGT
SCCTAGCAACAG---
 A C G T A C G T A C G T A G C T A C T G A T C G A C T G C G T A C G T A A G T C C G T A A C T G C G T A A C T G A C G T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TTGGGAACAGAGT
CCAGGAACAG---
 A C G T A G C T A C T G A T C G A C T G C G T A C G T A A G T C C G T A A C T G C G T A A C T G A C G T
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TTGGGAACAGAGT---
-YDGHTACAWTGTADC
 A C G T A G C T A C T G A T C G A C T G C G T A C G T A A G T C C G T A A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C

PB0133.1_Hic1_2/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TTGGGAACAGAGT
NNNNTTGGGCACNNCN-
 A C G T A C G T A C G T A C G T A C G T A G C T A C T G A T C G A C T G C G T A C G T A A G T C C G T A A C T G C G T A A C T G A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TTGGGAACAGAGT
--GTAAACAG---
 A C G T A G C T A C T G A T C G A C T G C G T A C G T A A G T C C G T A A C T G C G T A A C T G A C G T
A C G T A C G T C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G A C G T A C G T A C G T

Ar/MA0007.3/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TTGGGAACAGAGT------
--GGGAACACGGTGTACCC
 A C G T A G C T A C T G A T C G A C T G C G T A C G T A A G T C C G T A A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C T A G C T A G G C T A G T C A T A G C T C G A A G T C T A C G T C A G G A C T A T C G G C A T C G T A G A T C G A T C G A T C