p-value: | 1e-8 |
log p-value: | -2.001e+01 |
Information Content per bp: | 1.653 |
Number of Target Sequences with motif | 23.0 |
Percentage of Target Sequences with motif | 3.00% |
Number of Background Sequences with motif | 300.8 |
Percentage of Background Sequences with motif | 0.64% |
Average Position of motif in Targets | 56.1 +/- 23.3bp |
Average Position of motif in Background | 50.3 +/- 28.3bp |
Strand Bias (log2 ratio + to - strand density) | 0.9 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0070.1_Sox30_1/Jaspar
Match Rank: | 1 |
Score: | 0.74 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AAGGGCATTGTTC--- ANNTCCATTGTTCNNN |
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Sox5/MA0087.1/Jaspar
Match Rank: | 2 |
Score: | 0.73 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | AAGGGCATTGTTC ------ATTGTTA |
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MF0011.1_HMG_class/Jaspar
Match Rank: | 3 |
Score: | 0.73 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | AAGGGCATTGTTC ------ATTGTT- |
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Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer
Match Rank: | 4 |
Score: | 0.71 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | AAGGGCATTGTTC- ----CCATTGTTYB |
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Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer
Match Rank: | 5 |
Score: | 0.70 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | AAGGGCATTGTTC- ----CCATTGTTNY |
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Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer
Match Rank: | 6 |
Score: | 0.70 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | AAGGGCATTGTTC ---NCCATTGTTY |
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Sox1/MA0870.1/Jaspar
Match Rank: | 7 |
Score: | 0.70 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---AAGGGCATTGTTC AACAATGNTATTGTT- |
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PB0073.1_Sox7_1/Jaspar
Match Rank: | 8 |
Score: | 0.69 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---AAGGGCATTGTTC------ TNNANNTCTATTGTTNTNNANN |
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Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer
Match Rank: | 9 |
Score: | 0.69 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | AAGGGCATTGTTC ---NCCATTGTTC |
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PB0065.1_Sox15_1/Jaspar
Match Rank: | 10 |
Score: | 0.69 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AAGGGCATTGTTC---- ANNTCTATTGTTCNNNA |
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