Information for 7-NVVBTCCCYDGGG (Motif 3)

A G C T T C G A T C A G A C G T G A C T A G T C G A T C A G T C G A C T C T G A C T A G C T A G A C T G
Reverse Opposite:
A G T C A G T C G A T C G A C T C T G A C T A G C T A G A C T G C T G A T G C A A G T C A G C T T C A G
p-value:1e-23
log p-value:-5.298e+01
Information Content per bp:1.573
Number of Target Sequences with motif90.0
Percentage of Target Sequences with motif11.54%
Number of Background Sequences with motif1615.5
Percentage of Background Sequences with motif3.35%
Average Position of motif in Targets50.8 +/- 24.9bp
Average Position of motif in Background48.8 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:1
Score:0.91
Offset:2
Orientation:forward strand
Alignment:NVVBTCCCYDGGG-
--NGTCCCNNGGGA
 A G C T T C G A T C A G A C G T G A C T A G T C G A T C A G T C G A C T C T G A C T A G C T A G A C T G A C G T
A C G T A C G T C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A

EBF1/MA0154.3/Jaspar

Match Rank:2
Score:0.86
Offset:2
Orientation:reverse strand
Alignment:NVVBTCCCYDGGG---
--ANTCCCTNGGGAAT
 A G C T T C G A T C A G A C G T G A C T A G T C G A T C A G T C G A C T C T G A C T A G C T A G A C T G A C G T A C G T A C G T
A C G T A C G T C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.83
Offset:2
Orientation:forward strand
Alignment:NVVBTCCCYDGGG-
--GTCCCCAGGGGA
 A G C T T C G A T C A G A C G T G A C T A G T C G A T C A G T C G A C T C T G A C T A G C T A G A C T G A C G T
A C G T A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:4
Score:0.76
Offset:2
Orientation:forward strand
Alignment:NVVBTCCCYDGGG----
--ATTCCCTGAGGGGAA
 A G C T T C G A T C A G A C G T G A C T A G T C G A T C A G T C G A C T C T G A C T A G C T A G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:5
Score:0.75
Offset:2
Orientation:forward strand
Alignment:NVVBTCCCYDGGG----
--ATTGCCTGAGGCGAA
 A G C T T C G A T C A G A C G T G A C T A G T C G A T C A G T C G A C T C T G A C T A G C T A G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:6
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:NVVBTCCCYDGGG---
--NTGCCCTAGGGCAA
 A G C T T C G A T C A G A C G T G A C T A G T C G A T C A G T C G A C T C T G A C T A G C T A G A C T G A C G T A C G T A C G T
A C G T A C G T C G T A G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A G C T A

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:7
Score:0.74
Offset:3
Orientation:forward strand
Alignment:NVVBTCCCYDGGG--
---TGCCCCCGGGCA
 A G C T T C G A T C A G A C G T G A C T A G T C G A T C A G T C G A C T C T G A C T A G C T A G A C T G A C G T A C G T
A C G T A C G T A C G T G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:8
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:NVVBTCCCYDGGG-
--WTGSCCTSAGGS
 A G C T T C G A T C A G A C G T G A C T A G T C G A T C A G T C G A C T C T G A C T A G C T A G A C T G A C G T
A C G T A C G T G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C

TFAP2B/MA0811.1/Jaspar

Match Rank:9
Score:0.73
Offset:3
Orientation:forward strand
Alignment:NVVBTCCCYDGGG--
---TGCCCCAGGGCA
 A G C T T C G A T C A G A C G T G A C T A G T C G A T C A G T C G A C T C T G A C T A G C T A G A C T G A C G T A C G T
A C G T A C G T A C G T G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.72
Offset:2
Orientation:forward strand
Alignment:NVVBTCCCYDGGG-
--ATGCCCTGAGGC
 A G C T T C G A T C A G A C G T G A C T A G T C G A T C A G T C G A C T C T G A C T A G C T A G A C T G A C G T
A C G T A C G T G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C