Information for 15-GTCATGCTTT (Motif 11)

C T A G C G A T A G T C C G T A G A C T C T A G T A G C G C A T C G A T G A C T
Reverse Opposite:
C T G A G C T A C G T A A C T G A G T C C T G A A C G T C T A G C G T A A G T C
p-value:1e-10
log p-value:-2.425e+01
Information Content per bp:1.727
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.95%
Number of Background Sequences with motif241.4
Percentage of Background Sequences with motif0.50%
Average Position of motif in Targets53.9 +/- 28.2bp
Average Position of motif in Background48.8 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax2/MA0067.1/Jaspar

Match Rank:1
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-GTCATGCTTT
AGTCACGC---
 A C G T C T A G C G A T A G T C C G T A G A C T C T A G T A G C G C A T C G A T G A C T
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:2
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:GTCATGCTTT
GTCATN----
 C T A G C G A T A G T C C G T A G A C T C T A G T A G C G C A T C G A T G A C T
T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T

PAX1/MA0779.1/Jaspar

Match Rank:3
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GTCATGCTTT------
CGTCACGCATGACTGCA
 A C G T C T A G C G A T A G T C C G T A G A C T C T A G T A G C G C A T C G A T G A C T A C G T A C G T A C G T A C G T A C G T A C G T
A T G C C A T G G C A T G A T C T G C A G A T C C A T G A T G C G C T A G A C T A T C G T C G A T A G C G A C T C A T G T G A C G T C A

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GTCATGCTTT-----
NGTCACGCTTGGCTGC
 A C G T C T A G C G A T A G T C C G T A G A C T C T A G T A G C G C A T C G A T G A C T A C G T A C G T A C G T A C G T A C G T
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GTCATGCTTT----
GTCACGCTCNCTGA
 C T A G C G A T A G T C C G T A G A C T C T A G T A G C G C A T C G A T G A C T A C G T A C G T A C G T A C G T
A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A

PAX9/MA0781.1/Jaspar

Match Rank:6
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GTCATGCTTT------
CGTCACGCATGACTGCA
 A C G T C T A G C G A T A G T C C G T A G A C T C T A G T A G C G C A T C G A T G A C T A C G T A C G T A C G T A C G T A C G T A C G T
A T G C A C T G G C A T A G T C T G C A A G T C A C T G A T G C G C T A G A C T A T C G C T G A T A G C G A C T C A T G T G A C G T C A

Nr2e3/MA0164.1/Jaspar

Match Rank:7
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GTCATGCTTT
--CAAGCTT-
 C T A G C G A T A G T C C G T A G A C T C T A G T A G C G C A T C G A T G A C T
A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T

PAX5/MA0014.2/Jaspar

Match Rank:8
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GTCATGCTTT---------
GTCACGCTTGGCTGCNCNN
 C T A G C G A T A G T C C G T A G A C T C T A G T A G C G C A T C G A T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A T G G A C T A G T C G T C A G A T C T C A G T A G C G A C T A G C T A T C G T C A G A T G C G A C T C T A G T G A C G A T C A G T C G C A T A G T C

MEIS1/MA0498.2/Jaspar

Match Rank:9
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GTCATGCTTT
NTGTCAN-----
 A C G T A C G T C T A G C G A T A G T C C G T A G A C T C T A G T A G C G C A T C G A T G A C T
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:10
Score:0.65
Offset:-7
Orientation:reverse strand
Alignment:-------GTCATGCTTT
NNAATTAGTCACGGT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G A T A G T C C G T A G A C T C T A G T A G C G C A T C G A T G A C T
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T A C G T A C G T