Information for 9-TCCTGTAATT (Motif 9)

A C G T A T G C A G T C A C G T A T C G C A G T G C T A C G T A A G C T A C G T
Reverse Opposite:
G T C A C T G A C G A T C G A T G T C A T A G C C G T A C T A G A T C G T G C A
p-value:1e-9
log p-value:-2.203e+01
Information Content per bp:1.831
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.64%
Number of Background Sequences with motif78.8
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets34.9 +/- 21.9bp
Average Position of motif in Background47.0 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA5/MA0158.1/Jaspar

Match Rank:1
Score:0.71
Offset:2
Orientation:forward strand
Alignment:TCCTGTAATT
--CACTAATT
 A C G T A T G C A G T C A C G T A T C G C A G T G C T A C G T A A G C T A C G T
A C G T A C G T G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T

DLX6/MA0882.1/Jaspar

Match Rank:2
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:TCCTGTAATT--
----NTAATTGN
 A C G T A T G C A G T C A C G T A T C G C A G T G C T A C G T A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C G A T T C G A C G T A C A G T C A G T C T A G A T C G

Dlx4/MA0881.1/Jaspar

Match Rank:3
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:TCCTGTAATT--
----NTAATTGN
 A C G T A T G C A G T C A C G T A T C G C A G T G C T A C G T A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C G A T T C G A C G T A C A G T C A G T C T A G A T C G

Dlx3/MA0880.1/Jaspar

Match Rank:4
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:TCCTGTAATT--
----NTAATTGN
 A C G T A T G C A G T C A C G T A T C G C A G T G C T A C G T A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C G A T T C G A C G T A C A G T C A G T C T A G A T C G

ALX3/MA0634.1/Jaspar

Match Rank:5
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:TCCTGTAATT---
---NNTAATTAGA
 A C G T A T G C A G T C A C G T A T C G C A G T G C T A C G T A A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C G A T C T G A C G T A C A G T G A C T C T G A T C A G C T G A

Dlx2/MA0885.1/Jaspar

Match Rank:6
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:TCCTGTAATT--
----NTAATTGN
 A C G T A T G C A G T C A C G T A T C G C A G T G C T A C G T A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T G C A T T G C A C G T A C A G T C A G T C T A G A T G C

Prrx2/MA0075.2/Jaspar

Match Rank:7
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:TCCTGTAATT--
----NTAATTGN
 A C G T A T G C A G T C A C G T A T C G C A G T G C T A C G T A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C G A T C T G A C T G A A C G T A G C T C T A G T C A G

MIXL1/MA0662.1/Jaspar

Match Rank:8
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:TCCTGTAATT---
---NNTAATTANN
 A C G T A T G C A G T C A C G T A T C G C A G T G C T A C G T A A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G A G C T C G A T T C G A T C G A C G A T A G C T C T G A T C A G G C T A

MSX1/MA0666.1/Jaspar

Match Rank:9
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:TCCTGTAATT--
----NTAATTGG
 A C G T A T G C A G T C A C G T A T C G C A G T G C T A C G T A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A C G T T G C A G T C A A C G T A C G T C T A G T A C G

EN1/MA0027.2/Jaspar

Match Rank:10
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:TCCTGTAATT--
----CTAATTAG
 A C G T A T G C A G T C A C G T A T C G C A G T G C T A C G T A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G C A T T C G A C G T A A C G T A C G T C T G A T A C G