Information for 8-AACAAGTTCC (Motif 6)

T G C A C G T A A G T C C G T A C G T A A C T G C G A T A C G T A T G C G T A C
Reverse Opposite:
C A T G T A C G C G T A C G T A T G A C A C G T C G A T A C T G A C G T A C G T
p-value:1e-11
log p-value:-2.654e+01
Information Content per bp:1.845
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.64%
Number of Background Sequences with motif55.9
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets43.5 +/- 26.2bp
Average Position of motif in Background50.0 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0165.1_Sox11_2/Jaspar

Match Rank:1
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----AACAAGTTCC
NNCNNAACAATTNT-
 A C G T A C G T A C G T A C G T A C G T T G C A C G T A A G T C C G T A C G T A A C T G C G A T A C G T A T G C G T A C
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:2
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----AACAAGTTCC--
TNCNNAACAATTTTTNC
 A C G T A C G T A C G T A C G T A C G T T G C A C G T A A G T C C G T A C G T A A C T G C G A T A C G T A T G C G T A C A C G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

MF0011.1_HMG_class/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AACAAGTTCC
AACAAT----
 T G C A C G T A A G T C C G T A C G T A A C T G C G A T A C G T A T G C G T A C
T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AACAAGTTCC
GTAAACAAT----
 A C G T A C G T A C G T T G C A C G T A A G T C C G T A C G T A A C T G C G A T A C G T A T G C G T A C
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AACAAGTTCC
NAACAAT----
 A C G T T G C A C G T A A G T C C G T A C G T A A C T G C G A T A C G T A T G C G T A C
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T

TFCP2/MA0145.3/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AACAAGTTCC
AAACCGGTTT-
 A C G T T G C A C G T A A G T C C G T A C G T A A C T G C G A T A C G T A T G C G T A C
T C G A C G T A C G T A T A G C G A T C C T A G A T C G G C A T G A C T G A C T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:7
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------AACAAGTTCC-
GANGTTAACTAGTTTNN
 A C G T A C G T A C G T A C G T A C G T A C G T T G C A C G T A A G T C C G T A C G T A A C T G C G A T A C G T A T G C G T A C A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

PB0058.1_Sfpi1_1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AACAAGTTCC------
--NNACTTCCTCTTNN
 T G C A C G T A A G T C C G T A C G T A A C T G C G A T A C G T A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T G C T A C T G A A T G C C G A T C G A T A G T C A G T C A C G T A G T C G C A T G C A T G C T A T C G A

Sox11/MA0869.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AACAAGTTCC-----
AACAATTTCAGTGTT
 T G C A C G T A A G T C C G T A C G T A A C T G C G A T A C G T A T G C G T A C A C G T A C G T A C G T A C G T A C G T
C G T A C G T A A G T C C G T A C G T A A C G T A G C T C A G T A G T C C G T A A C T G A C G T A C T G A C G T A G C T

PB0063.1_Sox13_1/Jaspar

Match Rank:10
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----AACAAGTTCC-
TTAAGAACAATAAATT
 A C G T A C G T A C G T A C G T A C G T T G C A C G T A A G T C C G T A C G T A A C T G C G A T A C G T A T G C G T A C A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T