Information for 6-ATGCAGCCTYTTR (Motif 4)

C G T A A C G T A T C G A G T C C T G A A T C G A G T C A G T C A C G T A G T C A C G T A C G T C T A G
Reverse Opposite:
A G T C C G T A C G T A C T A G C G T A C T A G A C T G A T G C A G C T A C T G A T G C G T C A C G A T
p-value:1e-11
log p-value:-2.696e+01
Information Content per bp:1.843
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif12.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets43.2 +/- 31.2bp
Average Position of motif in Background38.6 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.59
Offset:3
Orientation:forward strand
Alignment:ATGCAGCCTYTTR
---CAGCC-----
 C G T A A C G T A T C G A G T C C T G A A T C G A G T C A G T C A C G T A G T C A C G T A C G T C T A G
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ATGCAGCCTYTTR-
AAGTCAGCANTTTTN
 A C G T C G T A A C G T A T C G A G T C C T G A A T C G A G T C A G T C A C G T A G T C A C G T A C G T C T A G A C G T
C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:ATGCAGCCTYTTR
--BCAGACWA---
 C G T A A C G T A T C G A G T C C T G A A T C G A G T C A G T C A C G T A G T C A C G T A C G T C T A G
A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ATGCAGCCTYTTR
NGTCAGCANTTT-
 C G T A A C G T A T C G A G T C C T G A A T C G A G T C A G T C A C G T A G T C A C G T A C G T C T A G
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ATGCAGCCTYTTR
-AGCAGCTGCT--
 C G T A A C G T A T C G A G T C C T G A A T C G A G T C A G T C A C G T A G T C A C G T A C G T C T A G
A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:6
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:ATGCAGCCTYTTR
---CAGCTGTT--
 C G T A A C G T A T C G A G T C C T G A A T C G A G T C A G T C A C G T A G T C A C G T A C G T C T A G
A C G T A C G T A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:ATGCAGCCTYTTR
--NCAGCTGCTG-
 C G T A A C G T A T C G A G T C C T G A A T C G A G T C A G T C A C G T A G T C A C G T A C G T C T A G
A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T

POL002.1_INR/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:ATGCAGCCTYTTR
--TCAGTCTT---
 C G T A A C G T A T C G A G T C C T G A A T C G A G T C A G T C A C G T A G T C A C G T A C G T C T A G
A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:ATGCAGCCTYTTR
NNGCAGCTGTT--
 C G T A A C G T A T C G A G T C C T G A A T C G A G T C A G T C A C G T A G T C A C G T A C G T C T A G
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T

CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-ATGCAGCCTYTTR------
RTTKCADNNKRTTGCATNAN
 A C G T C G T A A C G T A T C G A G T C C T G A A T C G A G T C A G T C A C G T A G T C A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T
T C G A C G A T A C G T C A T G T A G C G C T A C A G T A G C T T G A C C A G T T C G A A G C T A C G T C A T G G T A C G T C A G C A T G C T A C G T A A C G T