Information for 4-GAAATGGCRCCACCTG (Motif 3)

T C A G G T C A C T G A C T G A A C G T C A T G C T A G A T G C C T G A A G T C A G T C G T C A G T A C A G T C A C G T A C T G
Reverse Opposite:
T G A C T C G A A C T G A C T G A C G T A C T G A C T G G A C T A T C G A G T C G T A C G T C A A G C T A G C T A C G T A G T C
p-value:1e-17
log p-value:-3.930e+01
Information Content per bp:1.717
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.9 +/- 18.0bp
Average Position of motif in Background47.1 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F3/MA0469.2/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GAAATGGCRCCACCTG-
AAAAATGGCGCCATTTTT
 A C G T T C A G G T C A C T G A C T G A A C G T C A T G C T A G A T G C C T G A A G T C A G T C G T C A G T A C A G T C A C G T A C T G A C G T
C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:2
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GAAATGGCRCCACCTG---
----NRGCCCCRCCCHBNN
 T C A G G T C A C T G A C T G A A C G T C A T G C T A G A T G C C T G A A G T C A G T C G T C A G T A C A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

E2F2/MA0864.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GAAATGGCRCCACCTG
AAAATGGCGCCATTTT
 T C A G G T C A C T G A C T G A A C G T C A T G C T A G A T G C C T G A A G T C A G T C G T C A G T A C A G T C A C G T A C T G
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T

PB0052.1_Plagl1_1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GAAATGGCRCCACCTG
NNNGGGGCGCCCCCNN
 T C A G G T C A C T G A C T G A A C G T C A T G C T A G A T G C C T G A A G T C A G T C G T C A G T A C A G T C A C G T A C T G
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

PB0156.1_Plagl1_2/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GAAATGGCRCCACCTG--
-NNNNGGTACCCCCCANN
 T C A G G T C A C T G A C T G A A C G T C A T G C T A G A T G C C T G A A G T C A G T C G T C A G T A C A G T C A C G T A C T G A C G T A C G T
A C G T G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

YY1/MA0095.2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GAAATGGCRCCACCTG
CAAGATGGCGGC-----
 A C G T T C A G G T C A C T G A C T G A A C G T C A T G C T A G A T G C C T G A A G T C A G T C G T C A G T A C A G T C A C G T A C T G
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T A C G T A C G T A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:7
Score:0.58
Offset:6
Orientation:forward strand
Alignment:GAAATGGCRCCACCTG
------GCCCCGCCCC
 T C A G G T C A C T G A C T G A A C G T C A T G C T A G A T G C C T G A A G T C A G T C G T C A G T A C A G T C A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C

Sp1(Zf)/Promoter/Homer

Match Rank:8
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GAAATGGCRCCACCTG-
-----GGCCCCGCCCCC
 T C A G G T C A C T G A C T G A A C G T C A T G C T A G A T G C C T G A A G T C A G T C G T C A G T A C A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.57
Offset:8
Orientation:forward strand
Alignment:GAAATGGCRCCACCTG--
--------NNCACCTGNN
 T C A G G T C A C T G A C T G A A C G T C A T G C T A G A T G C C T G A A G T C A G T C G T C A G T A C A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A

FIGLA/MA0820.1/Jaspar

Match Rank:10
Score:0.57
Offset:8
Orientation:forward strand
Alignment:GAAATGGCRCCACCTG--
--------ACCACCTGTT
 T C A G G T C A C T G A C T G A A C G T C A T G C T A G A T G C C T G A A G T C A G T C G T C A G T A C A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T