Information for 9-AGAACAAGCACAG (Motif 3)

G T C A C T A G C G T A C T G A G T A C C G T A C G T A A C T G A G T C C G T A A G T C C T G A A C T G
Reverse Opposite:
A G T C A G C T A C T G A C G T A C T G A G T C A C G T C G A T A C T G A G C T A C G T A G T C A C G T
p-value:1e-14
log p-value:-3.233e+01
Information Content per bp:1.846
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.7 +/- 22.4bp
Average Position of motif in Background51.9 +/- 20.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:AGAACAAGCACAG
---CCAGGAACAG
 G T C A C T A G C G T A C T G A G T A C C G T A C G T A A C T G A G T C C G T A A G T C C T G A A C T G
A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:AGAACAAGCACAG-
----AAACCACAGC
 G T C A C T A G C G T A C T G A G T A C C G T A C G T A A C T G A G T C C G T A A G T C C T G A A C T G A C G T
A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

Gfi1b/MA0483.1/Jaspar

Match Rank:3
Score:0.61
Offset:4
Orientation:forward strand
Alignment:AGAACAAGCACAG--
----AAATCACAGCA
 G T C A C T A G C G T A C T G A G T A C C G T A C G T A A C T G A G T C C G T A A G T C C T G A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:AGAACAAGCACAG--
----AAACCACAGAN
 G T C A C T A G C G T A C T G A G T A C C G T A C G T A A C T G A G T C C G T A A G T C C T G A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AGAACAAGCACAG
---NAAACCACAG
 G T C A C T A G C G T A C T G A G T A C C G T A C G T A A C T G A G T C C G T A A G T C C T G A A C T G
A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.59
Offset:8
Orientation:reverse strand
Alignment:AGAACAAGCACAG-
--------CACAGN
 G T C A C T A G C G T A C T G A G T A C C G T A C G T A A C T G A G T C C G T A A G T C C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.58
Offset:4
Orientation:forward strand
Alignment:AGAACAAGCACAG-
----AAACCACANN
 G T C A C T A G C G T A C T G A G T A C C G T A C G T A A C T G A G T C C G T A A G T C C T G A A C T G A C G T
A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AGAACAAGCACAG--
---NWAACCACADNN
 G T C A C T A G C G T A C T G A G T A C C G T A C G T A A C T G A G T C C G T A A G T C C T G A A C T G A C G T A C G T
A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

PB0208.1_Zscan4_2/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AGAACAAGCACAG------
---CGAAGCACACAAAATA
 G T C A C T A G C G T A C T G A G T A C C G T A C G T A A C T G A G T C C G T A A G T C C T G A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.57
Offset:4
Orientation:forward strand
Alignment:AGAACAAGCACAG-
----AAATCACTGC
 G T C A C T A G C G T A C T G A G T A C C G T A C G T A A C T G A G T C C G T A A G T C C T G A A C T G A C G T
A C G T A C G T A C G T A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C