Information for 8-GGARCACTCACTT (Motif 2)

C T A G A C T G G T C A T C A G A G T C G T C A A G T C C A G T G A T C C G T A A T G C A C G T A G C T
Reverse Opposite:
T C G A C G T A A T C G A C G T C A T G G C T A C T A G A C G T A C T G A G T C A C G T A G T C A G T C
p-value:1e-16
log p-value:-3.717e+01
Information Content per bp:1.799
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.4 +/- 25.1bp
Average Position of motif in Background59.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGARCACTCACTT
GGACCACCCACG-
 C T A G A C T G G T C A T C A G A G T C G T C A A G T C C A G T G A T C C G T A A T G C A C G T A G C T
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GGARCACTCACTT
-AAGCACTTAA--
 C T A G A C T G G T C A T C A G A G T C G T C A A G T C C A G T G A T C C G T A A T G C A C G T A G C T
A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGARCACTCACTT
RGGGCACTAACY-
 C T A G A C T G G T C A T C A G A G T C G T C A A G T C C A G T G A T C C G T A A T G C A C G T A G C T
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGARCACTCACTT
GGGAGGACNG----
 A C G T C T A G A C T G G T C A T C A G A G T C G T C A A G T C C A G T G A T C C G T A A T G C A C G T A G C T
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGARCACTCACTT--
AGCGGCACACACGCAA
 A C G T C T A G A C T G G T C A T C A G A G T C G T C A A G T C C A G T G A T C C G T A A T G C A C G T A G C T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0099.1_Zfp691_1/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GGARCACTCACTT
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A C G T C T A G A C T G G T C A T C A G A G T C G T C A A G T C C A G T G A T C C G T A A T G C A C G T A G C T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GGARCACTCACTT
-AASCACTCAA--
 C T A G A C T G G T C A T C A G A G T C G T C A A G T C C A G T G A T C C G T A A T G C A C G T A G C T
A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GGARCACTCACTT
CCAGGAACAG------
 A C G T A C G T A C G T C T A G A C T G G T C A T C A G A G T C G T C A A G T C C A G T G A T C C G T A A T G C A C G T A G C T
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGARCACTCACTT
CGGAGC--------
 A C G T C T A G A C T G G T C A T C A G A G T C G T C A A G T C C A G T G A T C C G T A A T G C A C G T A G C T
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GGARCACTCACTT-
---NNACTTACCTN
 C T A G A C T G G T C A T C A G A G T C G T C A A G T C C A G T G A T C C G T A A T G C A C G T A G C T A C G T
A C G T A C G T A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G