Information for 8-GAGCCAATCAGCG (Motif 8)

A T C G T C G A T C A G A G T C T A G C C T G A C T G A A C G T T A G C T C G A A C T G A T G C A C T G
Reverse Opposite:
A G T C A T C G A G T C A C G T A T C G G T C A A G C T A G C T A C T G A C T G A G T C A C G T A T G C
p-value:1e-12
log p-value:-2.800e+01
Information Content per bp:1.780
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.33%
Number of Background Sequences with motif28.6
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets53.4 +/- 24.8bp
Average Position of motif in Background49.6 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYB/MA0502.1/Jaspar

Match Rank:1
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----GAGCCAATCAGCG
AAATGGACCAATCAG--
 A C G T A C G T A C G T A C G T A T C G T C G A T C A G A G T C T A G C C T G A C T G A A C G T T A G C T C G A A C T G A T G C A C T G
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:2
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-GAGCCAATCAGCG----
TGGACCAATCAGCACTCT
 A C G T A T C G T C G A T C A G A G T C T A G C C T G A C T G A A C G T T A G C T C G A A C T G A T G C A C T G A C G T A C G T A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.76
Offset:1
Orientation:forward strand
Alignment:GAGCCAATCAGCG
-AGCCAATCGG--
 A T C G T C G A T C A G A G T C T A G C C T G A C T G A A C G T T A G C T C G A A C T G A T G C A C T G
A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GAGCCAATCAGCG
ACTAGCCAATCA---
 A C G T A C G T A T C G T C G A T C A G A G T C T A G C C T G A C T G A A C G T T A G C T C G A A C T G A T G C A C T G
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T A C G T

PH0026.1_Duxbl/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GAGCCAATCAGCG---
CGACCCAATCAACGGTG
 A C G T A T C G T C G A T C A G A G T C T A G C C T G A C T G A A C G T T A G C T C G A A C T G A T G C A C T G A C G T A C G T A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

PH0109.1_Nkx1-1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GAGCCAATCAGCG---
TGCGCTAATTAGTGGGA
 A C G T A T C G T C G A T C A G A G T C T A G C C T G A C T G A A C G T T A G C T C G A A C T G A T G C A C T G A C G T A C G T A C G T
C G A T T A C G G T A C T C A G A G T C G A C T G T C A C G T A C G A T A C G T C T G A T C A G A G C T C A T G T A C G A C T G T C G A

PH0098.1_Lhx8/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GAGCCAATCAGCG---
ACCCCTAATTAGCGGTG
 A C G T A T C G T C G A T C A G A G T C T A G C C T G A C T G A A C G T T A G C T C G A A C T G A T G C A C T G A C G T A C G T A C G T
G C T A T G A C T G A C T G A C T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A G T C C A T G C A T G A C G T C T A G

Dux/MA0611.1/Jaspar

Match Rank:8
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GAGCCAATCAGCG
---CCAATCAA--
 A T C G T C G A T C A G A G T C T A G C C T G A C T G A A C G T T A G C T C G A A C T G A T G C A C T G
A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T

PH0032.1_Evx2/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GAGCCAATCAGCG---
ANCGCTAATTAGCGGTN
 A C G T A T C G T C G A T C A G A G T C T A G C C T G A C T G A A C G T T A G C T C G A A C T G A T G C A C T G A C G T A C G T A C G T
C G T A T G A C T G A C T A C G T A G C A G C T T G C A C G T A A C G T A C G T C T G A T A C G A G T C C A T G C T A G A C G T T C A G

PH0097.1_Lhx6_2/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GAGCCAATCAGCG---
TCCACTAATTAGCGGTT
 A C G T A T C G T C G A T C A G A G T C T A G C C T G A C T G A A C G T T A G C T C G A A C T G A T G C A C T G A C G T A C G T A C G T
G C A T T G A C G A T C T C G A G A T C G A C T T C G A C T G A A G C T A G C T C T G A C T A G A G T C C A T G C T A G C G A T A C G T