Information for 15-TGGCAGCARACAC (Motif 17)

A C G T A C T G A C T G A T G C G T C A T A C G A G T C C G T A C T G A C G T A G A T C C G T A A T G C
Reverse Opposite:
A T C G A C G T C A T G C G A T A G C T A C G T A C T G A G T C A C G T A T C G A G T C A G T C C G T A
p-value:1e-9
log p-value:-2.139e+01
Information Content per bp:1.839
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif14.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets31.5 +/- 25.5bp
Average Position of motif in Background47.3 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAGCARACAC
NTTGGCANN------
 A C G T A C G T A C G T A C T G A C T G A T G C G T C A T A C G A G T C C G T A C T G A C G T A G A T C C G T A A T G C
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGGCAGCARACAC
TTGGCA--------
 A C G T A C G T A C T G A C T G A T G C G T C A T A C G A G T C C G T A C T G A C G T A G A T C C G T A A T G C
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAGCARACAC
CTTGGCAA-------
 A C G T A C G T A C G T A C T G A C T G A T G C G T C A T A C G A G T C C G T A C T G A C G T A G A T C C G T A A T G C
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TGGCAGCARACAC
NNTTGGCANN------
 A C G T A C G T A C G T A C G T A C T G A C T G A T G C G T C A T A C G A G T C C G T A C T G A C G T A G A T C C G T A A T G C
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TGGCAGCARACAC----
-AGCGGCACACACGCAA
 A C G T A C T G A C T G A T G C G T C A T A C G A G T C C G T A C T G A C G T A G A T C C G T A A T G C A C G T A C G T A C G T A C G T
A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

E2F1/MA0024.3/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGGCAGCARACAC
TTTGGCGCCAAA---
 A C G T A C G T A C G T A C T G A C T G A T G C G T C A T A C G A G T C C G T A C T G A C G T A G A T C C G T A A T G C
G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TGGCAGCARACAC
GGTTGGCAT-------
 A C G T A C G T A C G T A C G T A C T G A C T G A T G C G T C A T A C G A G T C C G T A C T G A C G T A G A T C C G T A A T G C
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TGGCAGCARACAC
SCCTAGCAACAG----
 A C G T A C G T A C G T A C G T A C T G A C T G A T G C G T C A T A C G A G T C C G T A C T G A C G T A G A T C C G T A A T G C
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGGCAGCARACAC
TTGCAACATN---
 A C G T A C T G A C T G A T G C G T C A T A C G A G T C C G T A C T G A C G T A G A T C C G T A A T G C
C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAGCARACAC
SCTGTCARCACC---
 A C G T A C G T A C G T A C T G A C T G A T G C G T C A T A C G A G T C C G T A C T G A C G T A G A T C C G T A A T G C
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T A C G T A C G T