Information for 14-KCCWCACTTTGAA (Motif 16)

A C T G A G T C A G T C G C A T A T G C C G T A G T A C A C G T A C G T C G A T A T C G G T C A C G T A
Reverse Opposite:
C G A T A C G T A T G C C G T A T G C A G T C A C A T G C G A T A T C G C G T A C T A G T C A G T G A C
p-value:1e-9
log p-value:-2.258e+01
Information Content per bp:1.721
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif12.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets56.4 +/- 23.3bp
Average Position of motif in Background62.7 +/- 22.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.69
Offset:7
Orientation:reverse strand
Alignment:KCCWCACTTTGAA----
-------TTTGAAACCG
 A C T G A G T C A G T C G C A T A T G C C G T A G T A C A C G T A C G T C G A T A T C G G T C A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:KCCWCACTTTGAA--
-----CCTTTGATGT
 A C T G A G T C A G T C G C A T A T G C C G T A G T A C A C G T A C G T C G A T A T C G G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

LIN54/MA0619.1/Jaspar

Match Rank:3
Score:0.66
Offset:6
Orientation:forward strand
Alignment:KCCWCACTTTGAA--
------ATTTGAATT
 A C T G A G T C A G T C G C A T A T G C C G T A G T A C A C G T A C G T C G A T A T C G G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

TCF7L2/MA0523.1/Jaspar

Match Rank:4
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:KCCWCACTTTGAA----
---TNCCTTTGATCTTN
 A C T G A G T C A G T C G C A T A T G C C G T A G T A C A C G T A C G T C G A T A T C G G T C A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:5
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:KCCWCACTTTGAA--
---TNCCTTTGATGT
 A C T G A G T C A G T C G C A T A T G C C G T A G T A C A C G T A C G T C G A T A T C G G T C A C G T A A C G T A C G T
A C G T A C G T A C G T C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T

PB0082.1_Tcf3_1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:KCCWCACTTTGAA-----
-NNTTCCTTTGATCTANA
 A C T G A G T C A G T C G C A T A T G C C G T A G T A C A C G T A C G T C G A T A T C G G T C A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:7
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:KCCWCACTTTGAA--
-----CCTTTGAWGT
 A C T G A G T C A G T C G C A T A T G C C G T A G T A C A C G T A C G T C G A T A T C G G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:KCCWCACTTTGAA-----
-ATTTCCTTTGATCTATA
 A C T G A G T C A G T C G C A T A T G C C G T A G T A C A C G T A C G T C G A T A T C G G T C A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--KCCWCACTTTGAA---
NAGTTTCABTHTGACTNW
 A C G T A C G T A C T G A G T C A G T C G C A T A T G C C G T A G T A C A C G T A C G T C G A T A T C G G T C A C G T A A C G T A C G T A C G T
A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

PB0132.1_Hbp1_2/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--KCCWCACTTTGAA--
TGTTCCCATTGTGTACT
 A C G T A C G T A C T G A G T C A G T C G C A T A T G C C G T A G T A C A C G T A C G T C G A T A T C G G T C A C G T A A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T