Information for 6-ACGTDAGAGG (Motif 9)

C G T A A G T C A T C G A C G T C G A T G T C A A C T G C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A G T C A C G T G C T A C G T A A T G C A C T G A C G T
p-value:1e-10
log p-value:-2.429e+01
Information Content per bp:1.864
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.37%
Number of Background Sequences with motif34.0
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets60.8 +/- 24.9bp
Average Position of motif in Background51.0 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ACGTDAGAGG
ACWTCAAAGG
 C G T A A G T C A T C G A C G T C G A T G T C A A C T G C G T A A C T G A C T G
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G

Gmeb1/MA0615.1/Jaspar

Match Rank:2
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------ACGTDAGAGG-
GAGTGTACGTAAGATGG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A T C G A C G T C G A T G T C A A C T G C G T A A C T G A C T G A C G T
A T C G G T C A A C T G A C G T C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T A C G C G T A A G C T T C A G A T C G

PB0027.1_Gmeb1_1/Jaspar

Match Rank:3
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------ACGTDAGAGG-
GAGTGTACGTAAGATGG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A T C G A C G T C G A T G T C A A C T G C G T A A C T G A C T G A C G T
A T C G G T C A A C T G A C G T C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T A C G C G T A A G C T T C A G A T C G

GMEB2/MA0862.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ACGTDAGAGG
TTACGTAA----
 A C G T A C G T C G T A A G T C A T C G A C G T C G A T G T C A A C T G C G T A A C T G A C T G
A C G T C A G T C T G A G T A C A T C G A G C T T G C A T G C A A C G T A C G T A C G T A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ACGTDAGAGG
ACGTCA----
 C G T A A G T C A T C G A C G T C G A T G T C A A C T G C G T A A C T G A C T G
C T G A A G T C T C A G A C G T G T A C C G T A A C G T A C G T A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ACGTDAGAGG
TACGTGCV---
 A C G T C G T A A G T C A T C G A C G T C G A T G T C A A C T G C G T A A C T G A C T G
A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C A C G T A C G T A C G T

Crem/MA0609.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ACGTDAGAGG
TTACGTCATN--
 A C G T A C G T C G T A A G T C A T C G A C G T C G A T G T C A A C T G C G T A A C T G A C T G
A C G T A C G T C G T A A G T C A C T G A C G T G T A C C G T A A G C T G T C A A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ACGTDAGAGG---
AGGGGTCAGAGGTCA
 A C G T A C G T C G T A A G T C A T C G A C G T C G A T G T C A A C T G C G T A A C T G A C T G A C G T A C G T A C G T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ACGTDAGAGG---
GAGGTCAAAGGTCA
 A C G T C G T A A G T C A T C G A C G T C G A T G T C A A C T G C G T A A C T G A C T G A C G T A C G T A C G T
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ACGTDAGAGG--
ACATCAAAGGNA
 C G T A A G T C A T C G A C G T C G A T G T C A A C T G C G T A A C T G A C T G A C G T A C G T
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A