Information for 4-GGAAATGGTT (Motif 2)

C T A G A C T G C T G A T C G A T G C A C A G T A C T G C T A G G A C T A G C T
Reverse Opposite:
T C G A C T G A A G T C G T A C G T C A A C G T A G C T G A C T T G A C G A T C
p-value:1e-14
log p-value:-3.255e+01
Information Content per bp:1.679
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif6.84%
Number of Background Sequences with motif926.9
Percentage of Background Sequences with motif1.99%
Average Position of motif in Targets45.5 +/- 27.2bp
Average Position of motif in Background50.2 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GGAAATGGTT-
-NTAATKGTTT
 C T A G A C T G C T G A T C G A T G C A C A G T A C T G C T A G G A C T A G C T A C G T
A C G T A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GGAAATGGTT
ACAGGATGTGGT-
 A C G T A C G T A C G T C T A G A C T G C T G A T C G A T G C A C A G T A C T G C T A G G A C T A G C T
T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T A C G T

HLTF/MA0109.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGAAATGGTT
NNATAAGGNN
 C T A G A C T G C T G A T C G A T G C A C A G T A C T G C T A G G A C T A G C T
C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGAAATGGTT
GTTAATGGCC
 C T A G A C T G C T G A T C G A T G C A C A G T A C T G C T A G G A C T A G C T
A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GGAAATGGTT
NACAGGAAAT----
 A C G T A C G T A C G T A C G T C T A G A C T G C T G A T C G A T G C A C A G T A C T G C T A G G A C T A G C T
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:6
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GGAAATGGTT-
----ATTGTTA
 C T A G A C T G C T G A T C G A T G C A C A G T A C T G C T A G G A C T A G C T A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T

PB0165.1_Sox11_2/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGAAATGGTT-----
-AAAATTGTTATGAA
 C T A G A C T G C T G A T C G A T G C A C A G T A C T G C T A G G A C T A G C T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PB0046.1_Mybl1_1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGAAATGGTT-----
NNANTAACGGTTNNNAN
 A C G T A C G T C T A G A C T G C T G A T C G A T G C A C A G T A C T G C T A G G A C T A G C T A C G T A C G T A C G T A C G T A C G T
G C T A C T G A C G T A C G A T G A C T C T G A T C G A A G T C A T C G C A T G G A C T G A C T C G A T G A C T G A T C G C T A C T G A

PB0175.1_Sox4_2/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGAAATGGTT-----
GGAAAAATTGTTAGGAA
 A C G T A C G T C T A G A C T G C T G A T C G A T G C A C A G T A C T G C T A G G A C T A G C T A C G T A C G T A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PB0045.1_Myb_1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGAAATGGTT-----
NNNNTAACGGTTNNNAN
 A C G T A C G T C T A G A C T G C T G A T C G A T G C A C A G T A C T G C T A G G A C T A G C T A C G T A C G T A C G T A C G T A C G T
G C T A C T G A C G T A C G T A G A C T C T G A C G T A A G T C A T C G C A T G G A C T G A C T C A G T G T A C G T A C G C T A C G A T