Information for 6-AGTGCTCGGC (Motif 11)

C T G A A C T G C G A T C T A G A G T C A C G T A G T C A T C G A C T G A G T C
Reverse Opposite:
T C A G A G T C T A G C T C A G T G C A A C T G A G T C G C T A A G T C A G C T
p-value:1e-9
log p-value:-2.109e+01
Information Content per bp:1.841
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.32%
Number of Background Sequences with motif178.6
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets46.2 +/- 26.2bp
Average Position of motif in Background47.9 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----AGTGCTCGGC--
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T A C G T A C G T C T G A A C T G C G A T C T A G A G T C A C G T A G T C A T C G A C T G A G T C A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:2
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---AGTGCTCGGC
TTAAGTGCTT---
 A C G T A C G T A C G T C T G A A C T G C G A T C T A G A G T C A C G T A G T C A T C G A C T G A G T C
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----AGTGCTCGGC
NNGCNCTGCGCGGC
 A C G T A C G T A C G T A C G T C T G A A C T G C G A T C T A G A G T C A C G T A G T C A T C G A C T G A G T C
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AGTGCTCGGC
TTGAGTGSTT---
 A C G T A C G T A C G T C T G A A C T G C G A T C T A G A G T C A C G T A G T C A T C G A C T G A G T C
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AGTGCTCGGC---
---GCTCGGSCTC
 C T G A A C T G C G A T C T A G A G T C A C G T A G T C A T C G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:6
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------AGTGCTCGGC-
ACTCCAAGTACTTGGAA
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G C G A T C T A G A G T C A C G T A G T C A T C G A C T G A G T C A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----AGTGCTCGGC
CTYRAGTGSY----
 A C G T A C G T A C G T A C G T C T G A A C T G C G A T C T A G A G T C A C G T A G T C A T C G A C T G A G T C
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AGTGCTCGGC
TTRAGTGSYK---
 A C G T A C G T A C G T C T G A A C T G C G A T C T A G A G T C A C G T A G T C A T C G A C T G A G T C
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AGTGCTCGGC
NTCAAGTGG-----
 A C G T A C G T A C G T A C G T C T G A A C T G C G A T C T A G A G T C A C G T A G T C A T C G A C T G A G T C
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AGTGCTCGGC
NTCAAGTGGN----
 A C G T A C G T A C G T A C G T C T G A A C T G C G A T C T A G A G T C A C G T A G T C A T C G A C T G A G T C
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T A C G T