Information for 5-CTCCCTCCACAGG (Motif 4)

A G T C C G A T A G T C G A T C G T A C A C G T G T A C G T A C C G T A A T G C C G T A A C T G C A T G
Reverse Opposite:
G A T C G T A C C G A T A T C G A C G T A C T G A C T G G T C A C A T G C T A G T C A G C G T A T A C G
p-value:1e-11
log p-value:-2.547e+01
Information Content per bp:1.767
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.27%
Number of Background Sequences with motif134.0
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets55.9 +/- 27.3bp
Average Position of motif in Background52.3 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.66
Offset:7
Orientation:reverse strand
Alignment:CTCCCTCCACAGG
-------CACAGN
 A G T C C G A T A G T C G A T C G T A C A C G T G T A C G T A C C G T A A T G C C G T A A C T G C A T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

ZNF354C/MA0130.1/Jaspar

Match Rank:2
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CTCCCTCCACAGG
----ATCCAC---
 A G T C C G A T A G T C G A T C G T A C A C G T G T A C G T A C C G T A A T G C C G T A A C T G C A T G
A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CTCCCTCCACAGG-
--NWAACCACADNN
 A G T C C G A T A G T C G A T C G T A C A C G T G T A C G T A C C G T A A T G C C G T A A C T G C A T G A C G T
A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CTCCCTCCACAGG-
---AAACCACAGAN
 A G T C C G A T A G T C G A T C G T A C A C G T G T A C G T A C C G T A A T G C C G T A A C T G C A T G A C G T
A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CTCCCTCCACAGG
---AAACCACAGC
 A G T C C G A T A G T C G A T C G T A C A C G T G T A C G T A C C G T A A T G C C G T A A C T G C A T G
A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTCCCTCCACAGG
CNGTCACGCCAC---
 A C G T A C G T A G T C C G A T A G T C G A T C G T A C A C G T G T A C G T A C C G T A A T G C C G T A A C T G C A T G
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTCCCTCCACAGG
TCCAATCCACA--
 A G T C C G A T A G T C G A T C G T A C A C G T G T A C G T A C C G T A A T G C C G T A A C T G C A T G
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTCCCTCCACAGG
--NAAACCACAG-
 A G T C C G A T A G T C G A T C G T A C A C G T G T A C G T A C C G T A A T G C C G T A A C T G C A T G
A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CTCCCTCCACAGG-----
---GAGCAACAGGTGGTT
 A G T C C G A T A G T C G A T C G T A C A C G T G T A C G T A C C G T A A T G C C G T A A C T G C A T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

E2F8/MA0865.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTCCCTCCACAGG
TTTCCCGCCAAA--
 A C G T A G T C C G A T A G T C G A T C G T A C A C G T G T A C G T A C C G T A A T G C C G T A A C T G C A T G
G A C T A G C T A C G T A G T C A G T C A T G C T A C G A G T C T A G C C T G A C G T A G C T A A C G T A C G T