Information for 6-CCAGWGGGATCTK (Motif 11)

A G T C A G T C C G T A A C T G C G T A C T A G A C T G A C T G G T C A C G A T A G T C A C G T A C G T
Reverse Opposite:
G T C A C G T A A C T G G C T A A C G T A G T C A G T C A G T C C G A T A G T C A C G T A C T G A C T G
p-value:1e-6
log p-value:-1.500e+01
Information Content per bp:1.865
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.2 +/- 32.5bp
Average Position of motif in Background35.4 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CCAGWGGGATCTK---
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G C G T A C T A G A C T G A C T G G T C A C G A T A G T C A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PB0181.1_Spdef_2/Jaspar

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CCAGWGGGATCTK---
CTACTAGGATGTNNTN
 A G T C A G T C C G T A A C T G C G T A C T A G A C T G A C T G G T C A C G A T A G T C A C G T A C G T A C G T A C G T A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

PB0114.1_Egr1_2/Jaspar

Match Rank:3
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CCAGWGGGATCTK
TGCGGAGTGGGACTGG
 A C G T A C G T A C G T A G T C A G T C C G T A A C T G C G T A C T A G A C T G A C T G G T C A C G A T A G T C A C G T A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------CCAGWGGGATCTK-
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G C G T A C T A G A C T G A C T G G T C A C G A T A G T C A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCAGWGGGATCTK
AACAGATGGC----
 A C G T A G T C A G T C C G T A A C T G C G T A C T A G A C T G A C T G G T C A C G A T A G T C A C G T A C G T
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CCAGWGGGATCTK
DCTCAGCAGG-----
 A C G T A C G T A G T C A G T C C G T A A C T G C G T A C T A G A C T G A C T G G T C A C G A T A G T C A C G T A C G T
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:7
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------CCAGWGGGATCTK
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G C G T A C T A G A C T G A C T G G T C A C G A T A G T C A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CCAGWGGGATCTK
ATGCCAGACN------
 A C G T A C G T A C G T A G T C A G T C C G T A A C T G C G T A C T A G A C T G A C T G G T C A C G A T A G T C A C G T A C G T
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CCAGWGGGATCTK
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G C G T A C T A G A C T G A C T G G T C A C G A T A G T C A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

PB0204.1_Zfp740_2/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CCAGWGGGATCTK
ANTNCCGGGGGGAANTT
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G C G T A C T A G A C T G A C T G G T C A C G A T A G T C A C G T A C G T
C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T